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Recent Votes
- C: Plots coloring in BPGA pan genome analysis pipeline
- C: How to identify DNA sequences with ambiguous nucleotides such as N, Y, R, W.. in
- C: How to identify DNA sequences with ambiguous nucleotides such as N, Y, R, W.. in
- A: How to search for a protein sequence of an specific taxa in NCBI?
- A: How to search for a protein sequence of an specific taxa in NCBI?
- C: use Trimmomatic to remove adapter
- A: Bowtie2 command does not produce output file
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Recent Replies
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A: ROH-script for graphical visualization in R by
adily • 0
Hello, I'm looking for exactly the same solution... Did you find out how to visualize ROH on eac...
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C: Filtering VCF by FilterVCF picard by
Pierre Lindenbaum ♦ 133k
what is the output of `file 1245.marked_duplicates.vcf filtered.vcf`
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C: Adapters remains after cutting them out by
agata • 10
Thank you! It adding reverse-complement sequences of adapters solved the problem.
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C: Padj Values Problem For Multiple Samples in DESeq2 by
Aynur • 40
I am sorry, this p-value problem might be the easy one, but I am as a biologist having difficult...
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C: Filtering VCF by FilterVCF picard by
daffodil • 10
-I 1245.marked_duplicates.vcf -O filtered.vcf
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C: Understanding Variant Effect Predictor results by
caro-ca • 20
Thank you, I will send an email. On the other hand, I was looking at the position of an affected ...
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C: Plots coloring in BPGA pan genome analysis pipeline by
hafiz.talhamalik • 260
It generates multiple .plt files. If I remember correctly following were the names. kegg_plt.plt ...
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C: dbNSFP VEP plugin and tabix query give different results by
heikobrennenstuhl • 0
With pleasure! When I, for example, query the regions 17:47941571-47949308 for the PNPO gene (ENS...
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C: Plots coloring in BPGA pan genome analysis pipeline by
victoriamesa • 0
Thank you very much for your reply. Could you tell me which of all the .plt files to modify and w...
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C: A tool or algorithm to unify (combine) two sequences based on their global align by
ehsansepahi • 0
Thanks for your response. I knew about EMBOSS and it is included in Biopython, but, [the consensu...
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C: How to unify two sequences based on their global alignment? by
lieven.sterck ♦ 9.5k
"consensus" will be the word you're looking for :) there is a tool from the EMBOSS package that ...
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C: Filtering VCF by FilterVCF picard by
Pierre Lindenbaum ♦ 133k
what is the output of `file 1245.marked_duplicates.vcf filtered.vcf`
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