1 hour ago by
mithu18mohan
•
0
0
votes
0
replies
10
views
2
votes
2
replies
44
views
1 hour ago by
Mran
▴
10
0
votes
1
reply
51
views
0
votes
2
replies
94
views
updated 1 hour ago by
Alex Reynolds
32k
•
written 18 hours ago by
CHINMAYA
•
0
583
votes
155
replies
64k
views
89 follow
2
votes
3
replies
166
views
updated 9 hours ago by
Alex Reynolds
32k
•
written 4 days ago by
jaydu
•
0
0
votes
0
replies
29
views
0
votes
1
reply
64
views
updated 12 hours ago by
Mensur Dlakic
★
10k
•
written 18 hours ago by
shwetamgr1
•
0
0
votes
1
reply
65
views
updated 12 hours ago by
Mensur Dlakic
★
10k
•
written 14 hours ago by
1961012
•
0
3
votes
8
replies
185
views
single tumor vs multiple normal sample differential gene expression (RNA-Seq ) analysis using DESeq2
updated 4 hours ago by
Ram
32k
•
written 13 hours ago by
sumitguptabt
▴
10
0
votes
2
replies
74
views
1
vote
0
replies
50
views
1
vote
3
replies
149
views
0
votes
0
replies
38
views
0
votes
1
reply
56
views
updated 15 hours ago by
Rory Stark
★
1.0k
•
written 20 hours ago by
wei.zhang
•
0
0
votes
3
replies
106
views
updated 4 hours ago by
Ram
32k
•
written 20 hours ago by
BacPathomics
•
0
1
vote
2
replies
68
views
updated 21 hours ago by
Zhilong Jia
★
1.7k
•
written 21 hours ago by
Palgrave
▴
30
1
vote
2
replies
78
views
updated 16 hours ago by
Ram
32k
•
written 21 hours ago by
shubhamkumbhar420
•
0
0
votes
0
replies
42
views
0
votes
0
replies
28
views
0
votes
0
replies
1.1k
views
0
votes
0
replies
81
views
14 hours ago by
Apprentice
▴
50
0
votes
1
reply
97
views
0
votes
1
reply
65
views
updated 1 day ago by
jared.andrews07
9.3k
•
written 1 day ago by
raisamathenge
▴
10
0
votes
0
replies
103
views
1 day ago by
adamnaj
•
0
0
votes
0
replies
58
views
1 day ago by
timea.volenter
•
0
0
votes
0
replies
35
views
0
votes
2
replies
84
views
13 hours ago by
roybatty269
•
0
0
votes
0
replies
44
views
1 day ago by
fpizzagalli
•
0
0
votes
0
replies
40
views
0
votes
1
reply
68
views
updated 1 day ago by
Mensur Dlakic
★
10k
•
written 1 day ago by
noahhelton98
▴
10
2
votes
5
replies
266
views
updated 1 day ago by
Zhenyu Zhang
▴
280
•
written 6 weeks ago by
loughrae
▴
70
0
votes
1
reply
110
views
updated 1 day ago by
Zhenyu Zhang
▴
280
•
written 4 weeks ago by
p20170409
•
0
1
vote
3
replies
86
views
0
votes
5
replies
136
views
updated 1 day ago by
GenoMax
99k
•
written 1 day ago by
gonzalezb549
•
0
1
vote
1
reply
92
views
updated 1 day ago by
Kevin Blighe
72k
•
written 5 days ago by
moxu
▴
480
1
vote
1
reply
2.3k
views
updated 1 day ago by
Kevin Blighe
72k
•
written 3 days ago by
leesooyeon94
▴
10
3
votes
2
replies
107
views
9 hours ago by
Mran
▴
10
0
votes
0
replies
43
views
0
votes
4
replies
147
views
1 day ago by
lincaijin1994
•
0
1
vote
2
replies
115
views
0
votes
1
reply
60
views
1
vote
4
replies
109
views
updated 1 day ago by
Martombo
★
2.7k
•
written 1 day ago by
LacquerHed
•
0
0
votes
2
replies
75
views
updated 1 day ago by
cpad0112
15k
•
written 1 day ago by
twinklemishra0892
•
0
0
votes
3
replies
101
views
1 day ago by
najioumayma
▴
10
1
vote
2
replies
93
views
1
vote
2
replies
86
views
0
votes
0
replies
29
views
0
votes
1
reply
49
views
updated 1 day ago by
GenoMax
99k
•
written 1 day ago by
marongiu.luigi
▴
560
2
votes
1
reply
58
views
updated 1 day ago by
GenoMax
99k
•
written 1 day ago by
victoriahristovaa
•
0
Recent Votes
Recent Locations •
All
India, 4 minutes ago
Singapore, 8 minutes ago
Canada, 16 minutes ago
United States, 19 minutes ago
United States, 25 minutes ago
New York, 32 minutes ago
New Delhi, 33 minutes ago
Recent Awards •
All
Popular Question to
lakhujanivijay
5.4k
Teacher to
Alex Reynolds
32k
Popular Question to
minifoog
•
0
Popular Question to
A
★
3.9k
Popular Question to
Apprentice
▴
50
Scholar to
Kevin Blighe
72k
Appreciated to
Michael Dondrup
48k
Recent Replies
Comment: Negative values in Cox regression analysis
by
Mran
▴
10
Yes. I have seen your comment very useful. So thanks to you, I am now sure about my path in analysis.
Thanks so much
Comment: Job vacancies - postdoctoral position; Project Coordinator & Scientific Adminis
by
Ram
32k
Looks like it. Their institution has separate gender-specific campuses across multiple cities.
Comment: Meaning letters in TCGA sample barcode field
by
Ram
32k
Please avoid terms like "dear". This is a formal, professional setting and these words are of a more personal/intimate nature.
Comment: single tumor vs multiple normal sample differential gene expression (RNA-Seq ) a
by
Ram
32k
> The EdgeR was also showing an error during "DGEList" and asking for minimum 3 data samples for each group so I just duplicated the single…
Comment: Using EnrichedHeatmap for visualization of NGS experiments
by
goodwinjinesh
•
0
Thank you. Yes. I have one more question. Can I create a file only with first three columns (col-1: Chr1; col-2: Start; col-3: end) and exp…
Comment: Bam file metrics
by
GenoMax
99k
`Qualimap` ([LINK][1]) would be one good option for overall metrics. You will not get all the metrics you are looking from one package.
…
Comment: How to retrieve protein sequence from gene ID and output a fasta file
by
GenoMax
99k
Consider accepting the answer (green check mark) then.
Answer: Negative values in Cox regression analysis
by
Kevin Blighe
72k
Yes, you can use a dataset that comprises both positive and negative Z scores. I am assured that you understand what each value on the Z-sc…
Comment: Job vacancies - postdoctoral position; Project Coordinator & Scientific Adminis
by
grant.hovhannisyan
★
2.1k
only for men? :)
Comment: RNAseq data analysis of pooled data
by
grant.hovhannisyan
★
2.1k
hi, drop me an email to grant.hovhannisyan@gmail.com and I will send you the materials
Answer: bedtool closest
by
Alex Reynolds
32k
If you can use the `bedops` kit, you can use `closest-features` to solve this:
1. Separate reference and ncRNA files by strand and sort:
…
Comment: Contradiction in Harzard ratio and Log fold change
by
Mran
▴
10
Thank you so much. I think so, that some signaling pathways are involved here specially some regulators like Tumor suppressors and oncogene…
Answer: Visualize DNA sequence as a dot plot?
by
Alex Reynolds
32k
A text-based option might also be handy. Here's a Python script that uses the `sty` library:
#!/usr/bin/env python
'''
bi…
Comment: Meaning letters in TCGA sample barcode field
by
sumitguptabt
▴
10
Yeah sure, dear. It was my first question and thought that it may bring immediate attention. Although latter I resolved this issue myself b…
Comment: single tumor vs multiple normal sample differential gene expression (RNA-Seq ) a
by
sumitguptabt
▴
10
I tried EdgeR and DEseq2 however DEseq2 was showing an error during the creation of the DEseq2DataSet object from the matrix, It was only w…
Traffic: 1274 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6