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Posting a large interactive table online, supplementary to a publication?

R publishing shiny rna-seq written 2.2 years ago by EduardoFox • 10

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Forum: Publishing and research fees

publishing forum research funding written 4.1 years ago by baxy • 150 • updated 4.1 years ago by Chirag Nepal • 2.3k

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812

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Using SRA project & data when no information of the author is provided

ncbi sra publishing rna-seq publication written 4.4 years ago by dasdevashishdas • 120

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1.5k

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Is there any journal where you can post small programs to solve very specific tasks?

journal publishing paper written 4.9 years ago by rafa.rios.50 • 60 • updated 4.9 years ago by ALchEmiXt • 1.9k

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Publishing improved versions of algorithms - ethics and norms.

publishing written 5.8 years ago by Endre Bakken Stovner • 900 • updated 5.8 years ago by David W ♦ 4.8k

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3.0k

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11 follow

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Forum: On the utility of publishing a tool paper

poll publishing forum written 6.1 years ago by Matt Shirley ♦ 9.5k • updated 6.0 years ago by Istvan Albert ♦♦ 86k

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Recent Replies

C: K-mer sequencing vs sequence-alignment by alanmanden • 0
Sorry for the toy example, but that was the best I could come up with due to my limited knowledge...
C: CD-HIT: representative sequence vs consensus sequence by rob_DNA • 0
@Joe and @h.mon. Thank you for the valuable information. So if I understand it correctly: CD-HIT...
C: Why my normalization failed? by Omar Mohamed • 0
I figured out something. Only the grey dots are statistically significant. In that case that make...
A: how to unique a file row-wise? by shenwei356 ♦ 5.7k
Using GNU [datamash](https://www.gnu.org/software/datamash/) and [parallel](https://www.gnu.org/s...
C: scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics by Bogdan • 1.1k
Hi : i 'd think that one way would be to filter based on the number of counts per GENE at the b...
A: scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics by volkanergin • 0
Hi Bogdan, I have a similar issue struggling with, I am wondering if you were able to find a way...
C: IPA pathway for DESeq2 result by Rob • 20
Thanks swbarnes2. Isn't this shrinkage fold change?
C: I would like to add gene names to a volcano plot obtained from DEseq2 by krushnach80 • 860
that outright simple
C: Why my normalization failed? by Omar Mohamed • 0
It depends on cancer tissue, yes. But both of them are lung cancer, but different tissue type
C: I got a problem with making normal reference using cnvkit by bjwiley23 • 10
In the `batch` command does `autobin` only run on median file of tumor samples or median file of ...
C: Issue when merging FastQ by gayal25016 • 0
The issue is that, with my long reads, I cannot use overlap to merge PE into SE dataset, which is...
A: htseq-count error: "does not contain 'gene_id' by eennadi • 0
I have similar issues and have tried the various guides provided. My GFF file ##gff-version 3 ...

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