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Mutual Information for a collection of FASTA files
fasta python bash sequence mutualinformation written 11 weeks ago by nameuser • 30
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40
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Pairwise2 Gap penalty function for insertion errors
python alignment biopython sequencing written 2 days ago by trinityduke100 • 10
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1
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272
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1
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blast2gff IndexError: list index out of range
python gff blast2gff blast blastn written 5 months ago by Begonia_pavonina • 20 • updated 3 days ago by onkarnath89 • 0
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2
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5 follow
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Getting alignments with lower scores on Biopython
genome python sequence biopython written 5 days ago by trinityduke100 • 10 • updated 4 days ago by Mensur Dlakic • 8.1k
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102
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Pairwise2 Alignment Gap Penalties
python alignment biopython sequencing written 5 days ago by trinityduke100 • 10 • updated 4 days ago by Mark • 860
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Job: I'm highly motivated
python practise trainee barcelona job written 6 days ago by sergicarbajosa • 10
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Which python package to use for agent based modeling
python modeling agent-based modeling written 7 months ago by LizzAlice • 30 • updated 6 days ago by Zaphod • 0
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56
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Convert csv file to gff3 file
R sequence python written 6 days ago by ilana.caro • 0
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1
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248
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1
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Double Digest through Regular Expression in python
python regex resriction enzyme written 6 weeks ago by anasjamshed1994 • 60 • updated 7 days ago by Dunois • 490
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81
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How to get independent loci from gwas variants
gwas python R snp sequencing written 7 days ago by morse.endeavour86 • 0
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Likelihood distance matrix ( .mldist) to .csv or .txt
mldist R likelihood iqtree python written 11 weeks ago by mauricio.morales • 0 • updated 8 days ago by Biostar ♦♦ 20
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118
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Extracting amino acid positions from a fasta sequence
fasta python written 9 days ago by akang • 90 • updated 9 days ago by rpolicastro ♦ 3.2k
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How to filter evidence modeler gene prediction output
gene annotation awk shell python written 9 days ago by santhoshhegde278 • 0 • updated 9 days ago by Joe ♦ 18k
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117
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Pipelines in bash vs other languages
python pipeline bash written 14 days ago by jaynishshah • 0
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Job: Open positions at the Center for Molecular Oncology, MSKCC, New York
cancer python job sequencing R genetics written 3.3 years ago by Cyriac Kandoth ♦ 5.5k
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Bio.Align using smith-waterman local alignment causes memory leak
python dna sequence smith waterman alignment written 12 days ago by carlos_marchi • 60
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158
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Get drug target proteins from chembl_webresource_client
python chembl written 8 weeks ago by Yean • 130 • updated 12 days ago by Biostar ♦♦ 20
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6 follow
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How to parse a .fasta file in python ?
fasta python sequence written 16 days ago by 2001linana • 20 • updated 16 days ago by trausch • 1.5k
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Select sequences if contain two specific substrings
software error python sequence rna-seq written 7 weeks ago by Apex92 • 20 • updated 17 days ago by Biostar ♦♦ 20
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209
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1
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extract publication titles based on accession number from uniprot in python
python protein uniprot written 6 weeks ago by taojincs • 50
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How to convert columns to rows(seperated by comma) in Python(or R,linux)
R linux python seq sequencing written 24 days ago by szp770 • 0 • updated 24 days ago by Mensur Dlakic • 8.1k
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Tool: Extend 3' UTR of a GTF file
gtf annotation tool rna-seq python written 3 months ago by Shred • 230
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328
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Is there a function to tabulate exact match seq scoring using pwm weight table for Biopython?
python biopython written 25 days ago by ah07seven • 0
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4
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174
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5 follow
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how to combine two bed files using the same ID information
bed linux shell python written 27 days ago by szp770 • 0 • updated 27 days ago by Alex Reynolds ♦ 31k
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Job: Bigelow Laboratory seeking Bioinformatician
python job microbial ecology R written 28 days ago by vyoung • 0
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Find the first ORF of multiple fasta sequences using biopython
fasta python translate written 29 days ago by NewtoBioinfo • 0
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257
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Tutorial: Best Python Course
python tutorial ad written 28 days ago by ssai31935 • 10 • updated 28 days ago by cpad0112 ♦ 14k
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148
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Data filtering by creating dictionaries in python
python alignment partitioning written 4 weeks ago by mdgn • 10 • updated 4 weeks ago by Alex Reynolds ♦ 31k
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How to use python to rename files in a folder with known prefix, prefix are in excel?
rename R next-gen file python written 4 weeks ago by szp770 • 0 • updated 4 weeks ago by Kevin Blighe ♦ 69k
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Job: Postdoc in Natural Language Processing / Text Mining at DTU Biosustain
python ai pytorch job nlp written 4 weeks ago by info • 60
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