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<prev • 1,547 results • page 1 of 52 • next >
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bokeh is showing question mark insted of table id
python volcano volcano plot bokeh written 17 hours ago by sadri.amirhossein • 0
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Issue with running Codeml using Biopython
paml python biopython codeml linux written 2 days ago by laurenmee17 • 0
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Pysam VariantFile.fetch() without specifying contig
vcf python pysam written 4 days ago by ricardoguerreiro2121 • 0
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85
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Getting GFF annotation from sequence coordinates.
ncbi python gff gene annotation written 5 days ago by jsporter • 60
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How read a CSV file skipping the first column using python
genome python written 5 days ago by mandimunari • 0 • updated 5 days ago by steve • 1.9k
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Find mapping of indices of amino acid index in PDB files and sequence
pdb python sequence written 6 days ago by JJP • 0 • updated 6 days ago by natasha.sernova • 3.2k
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Trim sequences based on alignment in python
python alignment biopython written 6 days ago by Shred • 80 • updated 6 days ago by jrj.healey ♦ 9.6k
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How to back translate the protein into amino acids sequence with python?
python protein sequence rna-seq written 7 days ago by macadamopetrus • 0
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Create snakefile based on R script
R python snakemake snakefile written 7 days ago by r.tor • 0 • updated 7 days ago by WouterDeCoster ♦ 35k
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Output all atoms within a sphere of 3 A of the center of Trypsine
pdb bioinformatics protein biopython python written 7 days ago by a4appy23 • 0 • updated 7 days ago by finswimmer ♦ 8.8k
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I am having a problem with getting all the list of amino acid values from dict in python!
python protein biopython dictionary written 10 days ago by macadamopetrus • 0 • updated 9 days ago by jrj.healey ♦ 9.6k
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102
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Problem with getting branch support for phylogenetic tree
python biopython written 9 days ago by mdsiddra • 20
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102
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5 follow
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multiple DNA file Sliced to a fixed length substring by index/location
python bash awk written 13 days ago by jamesdong • 0
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7 follow
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How to merge overlapping ranges by R/Python?
overlap R merge sequence python written 15 days ago by nkuhuangyan • 0 • updated 15 days ago by ATpoint ♦ 12k
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News: Workshops in Bioinformatics in 2019
assembly news R rna-seq python written 15 days ago by carlopecoraro2 • 790
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Tool: Pyteomics - An Open-Source Python Framework For Mass Spectrometry (Ms) Based Proteomics
proteomics python sequence tool mass-spec written 5.8 years ago by lev.levitsky • 90
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How to extract intronic regions from a Genbank file?
genome python intron extract written 18 days ago by Evergreen • 0
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News: Introduction to Machine Learning Workshop
python news machinelearning bigdata written 20 days ago by carlopecoraro2 • 790
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ViennaRNA and Python
python viennrna written 4.6 years ago by tfadgreef • 0 • updated 26 days ago by moustafa.ismail • 0
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Anndata: finding cells that express a specific gene
python rna-seq written 26 days ago by Duckula • 0
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News: Free online Ensembl REST API training
jupyter python news rest api perl ensembl written 28 days ago by Emily_Ensembl ♦ 16k
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Creating text file as a temporary file in python
python biopython written 28 days ago by mdsiddra • 20
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UniProtKB - mapping gene name to ID (*_HUMAN ) using python2
python api uniprot databases parsing written 4 weeks ago by jg • 0 • updated 4 weeks ago by vkkodali • 850
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157
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1
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How to change name of species in FASTA file with BioPython
fasta python help question biopython written 4 weeks ago by Daphnia3000 • 0 • updated 4 weeks ago by gb • 570
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91
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Syntax error when trying to run the BAGEL algorithm (Python) for pooled CRISPR screen analysis
python bagel crispr screen written 4 weeks ago by kdelint • 0 • updated 4 weeks ago by WouterDeCoster ♦ 35k
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forgi for plotting 2D RNA structure
python forgi rna-seq graph structure written 5 weeks ago by galchenkova.mari • 0 • updated 5 weeks ago by Pierre Lindenbaum ♦ 116k
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Job: Recruiting for Statistical Geneticist, Open Targets Genetics, Wellcome Sanger Institute, Cambridge, UK
R python matlab job written 5 weeks ago by Recruit • 220 • updated 5 weeks ago by genomax ♦ 60k
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Job: Postdoctoral Fellows | Computational Omics in NYC
R cancer job genomics python written 6 weeks ago by kuan-lin.huang • 10
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132
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Different output fields from efetch
python efetch sequence written 5 weeks ago by Medhat ♦ 8.1k • updated 5 weeks ago by Pierre Lindenbaum ♦ 116k
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Trouble with sliding window for FASTA file in python
python written 5 weeks ago by asidhu • 10
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