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Recent Replies
Comment: Gene Tracks from 10x Data
by
ntsopoul
▴
10
Thanks a lot! I thought already that something similar might be the case... So by filtering you mean "grep" the cell ID of interest from th…
Answer: Gene Tracks from 10x Data
by
swbarnes2
12k
The bams that 10xGenomics makes are tagged with cell barcode. So figure out which call barcodes you want, then you can filter the bam acco…
Comment: Does this mean it is running? It has been like this for a while. I am using Trim
by
didi
•
0
all my questions involve my terminal path
Comment: Does this mean it is running? It has been like this for a while. I am using Trim
by
didi
•
0
my questions involve my path to my terminal which is a personal information. I won't post in this website ever again. Can you please delete…
Comment: Mutect2 error: Badly formed genome unclippedLoc
by
Ram
37k
OP has already mentioned what their error was. I'm moving your answer to a comment.
Comment: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
by
Kevin Blighe
83k
Cool - thank you
Comment: Does this mean it is running? It has been like this for a while. I am using Trim
by
Ram
37k
Hi, you deleted a post after being asked specifically not to delete it. Please stop abusing the forum or your account will be suspended.
Comment: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
by
cg_ref_database
▴
20
Thank you, Kevin! I am able to obtain the data using return(corvals).
Comment: scatter plot for DAPC
by
Elisa
•
0
Hello Jenna, could you then solve the problem? I see at the link above (by Jean-Karim Heriche) there is a graph with the same problem, but …
Comment: Decorrelated Composite of Multiple Signals in R
by
Ram
37k
Do not add an answer **unless you're actually answering** the top level question. Use `Add Comment` or `Add Reply` as appropriate instead. …
Comment: Strangely too low P-value and Adjusted P-value(FDR) DESeq2 and edgeR
by
vanottee
•
0
Hi bsh - did you ever come to a conclusion with this?
I have been using STAR alignment --> Stringtie assembly --> deseq2 DGE analysis, and…
Comment: DESeq or FPKM
by
Istvan Albert
96k
meta-analysis is a different kind of analysis altogether - you are supposed to be combining and analyzing the results and the outcomes of t…
Comment: Meta-analysis of gene expression data versus individual dataset analysis
by
jv
▴
620
> I have this question too, I have read the Rankprod paper, but I could not find the highlight.
What exactly is your question? Is this fo…
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