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4
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6 follow
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How To Retrieve Data From Jgi Automatically Given A Set Of Ids?
R api python xml written 5.0 years ago by Manu Prestat ♦ 3.8k • updated 9 hours ago by bison100 • 0
2
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1
answer
135
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1
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Reconstruction of simplest tree using multiple sequence alignment
phylogeny python written 3 days ago by mdsiddra • 10
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0
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53
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0
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News: Data manipulation and visualization with Python
bigdata news bioinformatics genomics python written 3 days ago by carlopecoraro2 • 780
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6
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2.0k
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10 follow
6
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How to remove duplicate sequences in fasta file using python?
python written 10 months ago by horsedog • 30 • updated 4 days ago by michau • 10
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50
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News: DataTech19 submission deadline and keynotes: Jared Lander, Mine Cetinkaya-Rundel, Debbie Bard
R python news conference news hpc data science written 4 days ago by caterina.constantinescu • 10
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3
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3
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How to parse GFF3 file and get start and end coordinates in Python
gff3 python parse written 3.6 years ago by rimjhim.roy.ch • 70 • updated 5 days ago by Biostar ♦♦ 20
3
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2
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119
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2
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Extract rows from file two having the 4th column ( which contain /1 /2 signs ) identical to column 7 from file 1 ( which doesn't have /1 /2 signs )
python written 10 days ago by i.jabre26 • 10 • updated 9 days ago by cpad0112 • 10k
5
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128
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Extract rows having the 11th column values lies between 2nd and 3nd of a second file if 1st column matches
perl python written 11 days ago by i.jabre26 • 10
2
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1
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76
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1
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How do I download and install DSSP?
python biopython dssp written 11 days ago by westin.kosater • 0 • updated 11 days ago by jrj.healey ♦ 8.7k
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0
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81
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0
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Ximmer running error
python java ximmer cnv R written 12 days ago by S AR • 50
1
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1
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3.5k
views
1
answer
Pairwise2 Biopython Module Get The Score In Variable
python alignment biopython written 5.0 years ago by Maria • 150 • updated 13 days ago by tslakshmipriya90 • 0
0
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0
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104
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0
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Error in converting seurat object to anndata class
python seurat rna-seq R written 15 days ago by Duckula • 0 • updated 15 days ago by h.mon ♦ 21k
1
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0
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180
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0
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Python Script to to convert orf gene into protein
gene python protein genetic code written 16 days ago by anasjamshed1994 • 0 • updated 16 days ago by RamRS ♦ 19k
5
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4
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167
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4
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Trying to use regular expressions to edit a PDB text file.What am I doing wrong?
python biopython regex written 17 days ago by westin.kosater • 0 • updated 17 days ago by jrj.healey ♦ 8.7k
27
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0
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6.6k
views
14 follow
0
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Tool: Snakemake--Python-Based Workflow Management
python workflow tool written 5.0 years ago by Sean Davis ♦ 25k • updated 17 days ago by carlopecoraro2 • 780
0
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0
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90
views
0
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How do I find a short protein sequence on python with fasta file from uniprot ?
fasta python protein sequence sequence written 18 days ago by biobio • 0 • updated 18 days ago by Pierre Lindenbaum ♦ 114k
1
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1
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126
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1
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How can I use biopython to extract each alpha carbon from a PDB file?
pdb python biopython written 18 days ago by westin.kosater • 0
5
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1
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6.2k
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5 follow
1
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Pairwise Sequence Alignment Using Pairwise2 Module With Biopython
pairwise python alignment biopython written 7.0 years ago by Mkl • 100 • updated 19 days ago by RamRS ♦ 19k
0
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1
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134
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1
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Reconstruction of a generic tree using dynamic data with python
python phylogenetics written 20 days ago by mdsiddra • 10 • updated 19 days ago by Brice Sarver • 2.5k
1
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1
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171
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1
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How to read an mpileup file from Samtools into Python
python next-gen samtools mpileup written 29 days ago by M.O.L.S • 0
3
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383
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0
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Forum: Cooperation for scientific project (python, deep learning, image recognition, histological images)
python image recognition deep learning forum job written 21 days ago by Yuri Tolkach • 40 • updated 21 days ago by Istvan Albert ♦♦ 78k
14
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561
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9 follow
0
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Forum: Bioinformatics experience in programming
python forum R written 11 weeks ago by lucas_ • 20 • updated 21 days ago by zx8754 ♦ 5.7k
2
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2
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215
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5 follow
2
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protein profile from alignment
profile protein seq terminal python written 23 days ago by Xylanaser • 10 • updated 22 days ago by fishgolden • 260
0
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149
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0
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Visualize Variant Density using Python
variant density python written 23 days ago by kristina.mahan • 20
5
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1
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90
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5 follow
1
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How to get the gene name with the array as headings in numpy-python?
array python numpy written 24 days ago by S AR • 50 • updated 24 days ago by Bastien Hervé • 2.4k
0
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0
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91
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0
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De Novo pathway generation
python rna-seq pathways written 24 days ago by Dirk • 60
0
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0
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82
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0
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Download summary tables from mg-Rast
python summary mg-rast download written 24 days ago by djeppschmidt • 0
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123
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How to find a specific sequence within noisy reads ?
python sequence match nanopore rna-seq written 26 days ago by florian.bernard5 • 30
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2
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223
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2
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Querying VEP using REST API
rest ensembl vep python R written 27 days ago by Arko • 10 • updated 26 days ago by Emily_Ensembl ♦ 16k
2
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1
answer
133
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1
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Convert ID gene from A. thaliana to Affymetrix code
python a. thaliana affymetrix written 29 days ago by lorenzo_fabbri • 10
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