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Retrieve title name by accession R vs Python
R entrez python written 2 days ago by Medhat ♦ 7.7k
1
vote
1
answer
66
views
1
answer
Regulatory network with python and R
R regulatory network python written 1 day ago by The Bright Star • 0 • updated 1 day ago by Bioaln • 280
7
votes
1
answer
911
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1
answer
Bio.SearchIO.HmmerIO only showing the best score domain
python hmmer written 2.5 years ago by Selenocysteine • 500 • updated 3 days ago by Biostar ♦♦ 20
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1
answer
66
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1
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Splitting genome 2bit files
genome python 2bit twobit testing written 3 days ago by c7750 • 0 • updated 3 days ago by Santosh Anand • 3.9k
8
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3
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268
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6 follow
3
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How to visualize gene structure of a (prokaryotic) locus?
genome R visualisation gene python written 7 days ago by ivan.antonov • 50 • updated 4 days ago by h.mon ♦ 19k
1
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0
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98
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0
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How to get PDB IDs for many fasta sequences?
pdb python sequence written 6 days ago by sl_99 • 0 • updated 6 days ago by Ram ♦ 17k
2
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2
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1.7k
views
2
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Problem iterating through BAM file using pysam
python sam bam forloop pysam written 2.6 years ago by c9r1y • 0 • updated 6 days ago by Ram ♦ 17k
1
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1
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1.3k
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1
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Retrieve expression data from Allen Brain Atlas API
python api allenbrainatlas brain written 2.6 years ago by randalljellis • 70 • updated 6 days ago by Ram ♦ 17k
53
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4
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13k
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12 follow
4
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Illumina Trimming Algorithm
python trimming illumina written 8.2 years ago by Science_Robot • 1.1k • updated 6 days ago by Ram ♦ 17k
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64
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News: Python course in Berlin. DEADLINE
python ngs news written 7 days ago by carlopecoraro2 • 760
6
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3
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192
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6 follow
3
answers
Get gene names from ensembl ID or gene region
ensembl rna-seq python written 7 days ago by angrypigeon • 120 • updated 7 days ago by Alex Reynolds ♦ 25k
0
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0
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99
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0
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How to identify contigs containing the degenerate primer sequences using python?
assembly sequence python written 7 days ago by xupbuy • 0 • updated 7 days ago by shenwei356 ♦ 4.1k
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212
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Job: Bioinformatics Programmer -- NYU Institute for Systems Genetics, NYC
illumina python job R synthetic biology written 9 days ago by maurano • 0
9
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317
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6 follow
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Forum: Bioinformatics experience in programming
python forum bioinformatics student R written 21 days ago by mat.lifepluse • 10 • updated 9 days ago by info • 0
1
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1
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85
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1
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Problems with extracting genes from a genbank file using biopython
gene genome biopython python written 10 days ago by beginner_problem • 0 • updated 10 days ago by Sej Modha ♦ 3.6k
9
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1
answer
2.3k
views
1
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Pysam Parses Certain Read Pairs Out Of Order?
python next-gen samtools sam sequencing written 8.2 years ago by User 9996 • 770 • updated 11 days ago by Ram ♦ 17k
12
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3
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6.5k
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5 follow
3
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Getting Genomic Sequences And Phastcons Scores Using Python From Ensembl/Ucsc?
ucsc python sequence biopython ensembl written 8.2 years ago by User 9996 • 770 • updated 11 days ago by Ram ♦ 17k
9
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1
answer
1.5k
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1
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Blast Results Wont Return
python blast written 8.2 years ago by Harpal • 30 • updated 11 days ago by Ram ♦ 17k
9
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4
answers
7.6k
views
5 follow
4
answers
Statistics: Combinations In Python
python statistics written 8.3 years ago by Eric Normandeau ♦ 9.9k • updated 11 days ago by Ram ♦ 17k
14
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3
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2.6k
views
3
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Parsing Custom Snp Info File In Python
python file parsing written 8.3 years ago by Eric Normandeau ♦ 9.9k • updated 11 days ago by Ram ♦ 17k
12
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3
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3.0k
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7 follow
3
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Phylip App'S Without Emboss Tool
python phylogenetics biopython written 8.3 years ago by Thaman • 3.2k • updated 11 days ago by Ram ♦ 17k
7
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1
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1.9k
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1
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Refining Data Stored In Sqlite - How To Join Several Contacts?
python chemoinformatics written 8.3 years ago by Krab • 40 • updated 12 days ago by Ram ♦ 17k
0
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0
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81
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0
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News: Course: Introduction to Python
python news programming written 12 days ago by carlopecoraro2 • 760
8
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1
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3.0k
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1
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Passing Alignment Parameters Through Clustalwcommandline
python clustalw multiple biopython written 8.3 years ago by Thaman • 3.2k • updated 13 days ago by Ram ♦ 17k
11
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1
answer
1.9k
views
1
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Subprocess Fails To Catch The Standard Output!
python written 8.3 years ago by Thaman • 3.2k • updated 13 days ago by Ram ♦ 17k
32
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5
answers
2.9k
views
8 follow
5
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I Wonder Why It Is So Important To Use Seq Objects In Stead Of Plain Ol' Strings In Biopyton?
python tutorial biopython seq written 8.4 years ago by Vlinxify • 90 • updated 13 days ago by Ram ♦ 17k
19
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4
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2.7k
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8 follow
4
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Simple Fasta Parsing Is Not Simple.
fasta python biopython file written 8.4 years ago by Vlinxify • 90 • updated 13 days ago by Ram ♦ 17k
31
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3
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21k
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8 follow
3
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How To Draw A Csv Data File As A Heatmap Using Numpy And Matplotlib
python visualization heatmap written 8.4 years ago by Schrodinger'S Cat • 210 • updated 13 days ago by Ram ♦ 17k
7
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3
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2.6k
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3
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Does Biopython Parse Blast -M8 Or -M9 (Aka Blasttable)?
python biopython written 8.4 years ago by Jeremy Leipzig ♦ 17k • updated 14 days ago by Ram ♦ 17k
95
votes
7
answers
70k
views
26 follow
7
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Correct Way To Parse A Fasta File In Python
fasta python parsing written 8.4 years ago by Eric Normandeau ♦ 9.9k • updated 14 days ago by Ram ♦ 17k
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