Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : today
all time
today
this week
this month
this year
0 results • Page
1 of 1
Sort: Rank
Rank
Views
Votes
Replies
Topic contains no posts.
No posts found.
0 results • Page
1 of 1
Recent Votes
Answer: Samtools - huge mpileup file!
Answer: Samtools - huge mpileup file!
A: reading a bed file in R
A: reading a bed file in R
Comment: How to Calulate Allele Frequency from a VCF File?
Answer: Is there a command to annotate genes from a txt file?
Answer: Single cell RNA-seq analysis
Recent Locations •
All
United States,
just now
Tehran,
2 minutes ago
United States,
5 minutes ago
Cambridge, MA,
6 minutes ago
United Kingdom,
7 minutes ago
Saudi Arabia,
7 minutes ago
São Paulo,
8 minutes ago
Recent Awards •
All
Popular Question
to
yoosefyud
▴ 40
Popular Question
to
re_raz
▴ 40
Popular Question
to
Lucy
▴ 110
Teacher
to
ATpoint
68k
Popular Question
to
tianshenbio
▴ 160
Popular Question
to
maxdlf12
• 0
Teacher
to
Pierre Lindenbaum
152k
Recent Replies
Answer: Problem using SRAtoolkit
by
GenoMax
125k
Message tells you what you need to do. You need to provide an SRA accession number of name of a downloaded `.sra` file with this command. …
Comment: mrbayes checkpoint file not starting from linux or windows after accidental clos
by
GenoMax
125k
Information about this issue is posted in a different thead: https://www.biostars.org/p/9552006/#9552599 > Hello Mensur, Could you look a…
Comment: how to do a reliable single cell sequencing analysis?
by
apple4lee
• 0
Thank you for your reply. i followed Seurat tutorial of doing analysis, but I found I use different parameters from that paper. This makes …
Comment: transcriptomincs
by
GenoMax
125k
You can assemble transcripts without using a reference (de novo): https://github.com/trinityrnaseq/trinityrnaseq/wiki You could then compa…
Comment: How to Calulate Allele Frequency from a VCF File?
by
Emoji
• 0
Thanks, but how do i do that?
Answer: transcriptomincs
by
Apex92
▴ 240
Yes, you can use a reference genome from a related species to assemble transcripts of a target species. This approach is known as ```de nov…
Answer: MrBayes tree in RAxML
by
omaridris5315
• 0
any tree is a valid hypothesis
Comment: How to continue a interrupted MrBayes tree analysis?
by
omaridris5315
• 0
Hello Mensur, Could you look at my case too? interruption issue but a different error. This is the second time I face and I rerun it. I ha…
Comment: mrbayes checkpoint file not starting from linux or windows after accidental clos
by
omaridris5315
• 0
my convergence value at 23 million run for last 10 days was at .017623 something. out of 7 million more remaining.
Comment: How to calculate Minion run time needed?
by
andres.firrincieli
3.1k
> Does someone know how to calculate how many hours (approximately) i > need to run an minion, to get a good coverage for example of bacter…
Answer: how to do a reliable single cell sequencing analysis?
by
ATpoint
68k
The usual approach for starters would be to follow guided and well-accepted tutorials. That would (incomplete list) be: - The Biocon…
Comment: a problem with getBM
by
sanaz
• 0
head(ensembl_ids) X baseMean log2FoldChange lfcSE stat pvalue padj 1 ENSG00000000938.13 …
Answer: Recommendations needed for a tool for comparative gene set enrichment analyses v
by
fuellen
▴ 20
Hello and Thanks! OK, I should have written "The gene lists I have prepared" instead of "The DEG lists I have prepared". In any case, is …
Comment: a problem with getBM
by
Mike Smith
★ 1.9k
Can you update your post to show some examples of what's in your `ensembl_ids` object? Perhaps the contents of `head(ensembl_ids)`. It's …
Answer: trainGlimmerHMM Error while training a genome
by
congliu37
• 0
Hello, I got the same error using ~20,000 genes for training and it was solved by reducing training gene set. I assume GlimmerHMM was no…
Traffic: 782 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6