Showing: tpmreset
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Calculate TPM from cuffnorm count data
fpkm cufflinks tpm cuffnorm rna-seq written 7 days ago by galozs0 • updated 7 days ago by Macspider2.0k
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301
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Cutoff for TPM value
tpm transcriptome written 3 months ago by Picasa320 • updated 4 weeks ago by Macspider2.0k
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292
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Data for drawing Heatmaps (RNA-seq)
fpkm heatmap tpm rna-seq tmm written 3 months ago by sd.gamboa.t0 • updated 3 months ago by Corentin100
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301
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How to calculate TPM of transcripts with isoforms
gene tpm transcript rna-seq written 3 months ago by marcosp.belem0 • updated 3 months ago by Rob2.2k
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Filtering out low expressed genes in RNA-Seq data
preprocessing tpm rna-seq written 3 months ago by lessismore380 • updated 3 months ago by i.sudbery1.8k
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5 follow
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Converting TCGA expression data from FPKM to TPM
fpkm tcga tpm rna-seq expression written 2.3 years ago by Alex Reynolds22k • updated 4 months ago by fabio-verdao0
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Are TPM values generated by different programs comparable?
stringtie tpm kallisto written 4 months ago by amy.bashir60 • updated 4 months ago by h.mon10k
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7 follow
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Is there a way to calculate p-values, FDR or t test starting from logFC data?
R tpm written 5 months ago by Spacebio160 • updated 5 months ago by theobroma221.1k
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Dataset normalised to TPM (GSE85066)
R tpm rna-seq rstudio deg written 5 months ago by Vania10 • updated 5 months ago by h.mon10k
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568
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8 follow
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TPM to logFC and pvalues
R tpm rna-seq dataanalysis written 5 months ago by Spacebio160
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339
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TPM (trancripts per million) RNA-Seq analysis
R tpm rna-seq rstudio written 6 months ago by Spacebio160 • updated 6 months ago by grant.hovhannisyan340
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TPM for low numbers of counts
sc rna seq tpm rna-seq written 7 months ago by ly.leifels0 • updated 7 months ago by Istvan Albert ♦♦ 75k
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Converting TPM to FPKM
fpkm tpm rna-seq written 8 months ago by alexahes10 • updated 8 months ago by karl.stamm3.2k
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Common Cutoff in TPM unit to filter out gene considered as low expressed.
tpm salmon rna-seq written 11 months ago by ZheFrench70 • updated 11 months ago by Devon Ryan74k
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Convert read counts to RPKM or TPM values: Numbers don't look right?
geo rpkm gene expression tpm written 12 months ago by Tom10 • updated 12 months ago by mforde841.1k
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Tools for calculating TPM from BAM files
gene expression tpm bam written 13 months ago by 30977248610 • updated 13 months ago by Ron690
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21
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13 follow
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Using transcripts per million (TPM)
deseq2 tpm rna-seq written 2.9 years ago by Tom Harrop140 • updated 16 months ago by Biostar ♦♦ 20
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PCA tpm fpkm
pca fpkm tpm written 16 months ago by riccardo40 • updated 16 months ago by Ar710
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4
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1.6k
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TPM for ChIP-seq normalization
chip-seq tpm written 19 months ago by peeyushsahu240 • updated 19 months ago by Ryan Thompson3.3k
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695
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Calculating RPKM/TPM for repetitive elements.
rpkm tpm rna-seq written 22 months ago by guilhermebdias30 • updated 20 months ago by Biostar ♦♦ 20
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