Showing: tpmreset
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7
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3
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1.2k
views
5 follow
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Converting TPM to FPKM
fpkm tpm rna-seq written 21 months ago by alexahes10 • updated 16 days ago by Charles Warden6.1k
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50
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1
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0
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507
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TCGA expression data (TPM)
tcgabiolinks tcga tpm expression written 5 months ago by Folder40g110 • updated 23 days ago by Israel Barrantes730
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165
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0
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176
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2
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218
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6
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3
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190
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DE Analysis starting from TPM matrix? Also, no replicates.
tpm rna-seq written 12 weeks ago by basch0 • updated 12 weeks ago by Michael Dondrup45k
1
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2
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1.3k
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2
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TMM.normalized.FPKM vs .TMM.EXPR.matrix for populating SQL
trinity fpkm tpm sql edger written 2.3 years ago by ando.kelli40 • updated 4 months ago by egtabilin0
9
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1
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356
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6 follow
1
answer
2
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2
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976
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2
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8
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1
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1.5k
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6 follow
1
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TMM or TPM normalized counts for visualization?
normalization tpm edger tmm written 8 months ago by sam.vanc7020 • updated 8 months ago by Devon Ryan88k
1
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0
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688
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0
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Kallisto TPM values
tpm kallisto written 8 months ago by oliveira.bhn10
5
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2
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450
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2
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How to analyse RNA-Seq data with JUST geneID and TPM values
geneid tpm rna-seq dge written 9 months ago by andorjkiss10 • updated 9 months ago by igor7.3k
1
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1
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486
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1
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Conversion read counts to TPM for microRNAs
tpm mirna written 10 months ago by lessismore570 • updated 10 months ago by Buffo1.2k
4
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1
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1.6k
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5 follow
1
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Calculating TPM Values
tpm rna-seq sequencing written 10 months ago by biocool201820 • updated 10 months ago by Tao270
0
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1
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558
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1
answer
Converting expected counts to TPM values
rnaseq expected-counts reads mcf10a tpm written 11 months ago by bhchiang0 • updated 11 months ago by Kevin Blighe37k
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424
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0
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Choice of Gene Length in TPM Calculations
tpm rna-seq written 11 months ago by dec986130
2
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1
answer
1.0k
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1
answer
Calculate TPM from cuffnorm count data
fpkm cufflinks tpm cuffnorm rna-seq written 13 months ago by galozs20 • updated 13 months ago by Macspider2.7k
1
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1
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1.2k
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1
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Cutoff for TPM value
tpm transcriptome written 16 months ago by Picasa390 • updated 14 months ago by Macspider2.7k
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2
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1
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1.2k
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0
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1.0k
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0
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3
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1
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2.7k
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5 follow
1
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Data for drawing Heatmaps (RNA-seq)
fpkm heatmap tpm rna-seq tmm written 16 months ago by sd.gamboa.t30 • updated 16 months ago by Corentin230
2
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1
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1.1k
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1
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How to calculate TPM of transcripts with isoforms
gene tpm transcript rna-seq written 16 months ago by marcosp.belem0 • updated 16 months ago by Rob3.1k
3
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1
answer
3.2k
views
1
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Filtering out low expressed genes in RNA-Seq data
preprocessing tpm rna-seq written 16 months ago by lessismore570 • updated 16 months ago by i.sudbery3.7k
11
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2
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9.9k
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5 follow
2
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Converting TCGA expression data from FPKM to TPM
fpkm tcga tpm rna-seq expression written 3.4 years ago by Alex Reynolds27k • updated 17 months ago by fabio-verdao0
3
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1
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762
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1
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Are TPM values generated by different programs comparable?
stringtie tpm kallisto written 17 months ago by amy.bashir80 • updated 17 months ago by h.mon23k
5
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3
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1.1k
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7 follow
3
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Is there a way to calculate p-values, FDR or t test starting from logFC data?
R tpm written 18 months ago by Spacebio180 • updated 18 months ago by theobroma221.1k
2
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1
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657
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1
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Dataset normalised to TPM (GSE85066)
R tpm rna-seq rstudio deg written 18 months ago by Vania10 • updated 18 months ago by h.mon23k
9
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2
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2.2k
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8 follow
2
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TPM to logFC and pvalues
R tpm rna-seq dataanalysis written 18 months ago by Spacebio180
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