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Comment: Comment: How can I confirm that I installed bcl2fastq correctly?
3.2 years ago by bioinfo ▴ 160
4
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4
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2.2k
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How can I confirm that I installed bcl2fastq correctly?
bcl2fastq linux ubuntu
3.2 years ago by bioinfo ▴ 160
3
votes
2
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1.1k
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Why do I get a positive gene expression with qPCR for one my genes but in with when doing bulk RNA seq I get a count of 0?
gene qpcr kallisto seq expression rna
updated 3.3 years ago by ★ 7.8k • written 3.3 years ago by ▴ 160
1
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3
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1.3k
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How to filter .fa file by gene_biotype
rna-seq kallisto
updated 3.4 years ago by 45k • written 3.5 years ago by ▴ 160
0
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1
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2.2k
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Comment: Comment: How to create kallisto index that does not include ribosomal genes
3.5 years ago by bioinfo ▴ 160
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1
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2.2k
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Comment: Comment: How to create kallisto index that does not include ribosomal genes
3.5 years ago by bioinfo ▴ 160
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7
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2.2k
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6 follow
How to create kallisto index that does not include ribosomal genes
enseml kallisto RNA-seq
updated 2.9 years ago by 45k • written 3.5 years ago by ▴ 160
0
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0
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532
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Replicates in sc-RNA seq have different amount of cells-Can I still use them for the analysis?
Cell seurat Single
updated 3.5 years ago by 90k • written 3.5 years ago by ▴ 160
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2
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1.6k
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Comment: Comment: Can I use the transcripts_to_genes.txt file from kallisto for bulk RNA seq data?
3.6 years ago by bioinfo ▴ 160
2
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4
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1.6k
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Can I use the transcripts_to_genes.txt file from kallisto for bulk RNA seq data?
kallisto
updated 3.6 years ago by 45k • written 3.6 years ago by ▴ 160
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1
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2.9k
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Comment: Comment: Ensembl version for mapping and annotating genes
3.6 years ago by bioinfo ▴ 160
3
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3
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2.9k
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Ensembl version for mapping and annotating genes
rna-seq kallisto
updated 3.4 years ago by 45k • written 3.6 years ago by ▴ 160
6
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2
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1.0k
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Ensembl version
ensembl kallisto
updated 2.9 years ago by 45k • written 3.6 years ago by ▴ 160
2
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2
replies
3.9k
views
Cellranger command for RNA velocity
cellranger Cell velocity RNA Single
updated 3.8 years ago by 9.0k • written 3.8 years ago by ▴ 160
4
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2
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1.5k
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Estimated gene counts with tximport
RNA-seq ensembl tximport kallisto
updated 3.4 years ago by 45k • written 3.8 years ago by ▴ 160
3
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3
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1.9k
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Will Kallisto show a decrease in the TPM value if I have knocked out 2 of the 8 exons from a gene?
RNA-seq
updated 3.4 years ago by 45k • written 3.9 years ago by ▴ 160
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0
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1.7k
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Comment: Comment: How to demultiplex a single indexed library on a dual indexed flow cell?
3.9 years ago by bioinfo ▴ 160
2
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2
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1.7k
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How to demultiplex a single indexed library on a dual indexed flow cell?
Cell Single
updated 4.0 years ago by 154k • written 4.0 years ago by ▴ 160
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