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0
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1.8k
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Comment:
Comment: CNVKit does not output all the accessible regions in the targets bed file
17 months ago by
ashenflower
▴ 30
0
votes
1
reply
1.8k
views
Comment:
Comment: CNVKit does not output all the accessible regions in the targets bed file
17 months ago by
ashenflower
▴ 30
0
votes
1
reply
1.8k
views
Comment:
Comment: CNVKit does not output all the accessible regions in the targets bed file
17 months ago by
ashenflower
▴ 30
0
votes
1
reply
1.8k
views
Comment:
Comment: CNVKit does not output all the accessible regions in the targets bed file
17 months ago by
ashenflower
▴ 30
3
votes
9
replies
1.8k
views
CNVKit does not output all the accessible regions in the targets bed file
CNVkit
cnv
bed
target
wgs
17 months ago by
ashenflower
▴ 30
0
votes
0
replies
526
views
Control-FREEC output
cancer
CNV
copy
FREEC
number
17 months ago by
ashenflower
▴ 30
0
votes
0
replies
447
views
CNVkit: setting arbitrary bin size for WGS data
CNV
CNVkit
wgs
updated 13 months ago by
Ram
43k • written 17 months ago by
ashenflower
▴ 30
2
votes
0
replies
379
views
Absolute and relative Copy numbers, tumor and ploidy
number
copy
ploidy
tumor
17 months ago by
ashenflower
▴ 30
0
votes
1
reply
931
views
Comment:
Comment: Using Copy Number Alterations detected in other studies for the same tumor cell
17 months ago by
ashenflower
▴ 30
1
vote
3
replies
931
views
Using Copy Number Alterations detected in other studies for the same tumor cell line
genomes
cancer
CNV
variants
CNA
updated 13 months ago by
lethalfang
▴ 140 • written 17 months ago by
ashenflower
▴ 30
0
votes
0
replies
581
views
Comment:
Comment: Benchmark data for variant calling assessment
19 months ago by
ashenflower
▴ 30
0
votes
2
replies
581
views
Benchmark data for variant calling assessment
genomes
variants
benchmark
calling
structural
19 months ago by
ashenflower
▴ 30
0
votes
0
replies
1.2k
views
Comment:
Comment: BLAST, set a limit to the number of hits in output
20 months ago by
ashenflower
▴ 30
0
votes
0
replies
1.2k
views
Comment:
Comment: BLAST, set a limit to the number of hits in output
20 months ago by
ashenflower
▴ 30
2
votes
11
replies
1.2k
views
BLAST, set a limit to the number of hits in output
blastn
output
blast
hits
updated 20 months ago by
Asaf
10k • written 20 months ago by
ashenflower
▴ 30
0
votes
1
reply
765
views
Comment:
Comment: creating a subset of a BLAST database
21 months ago by
ashenflower
▴ 30
0
votes
3
replies
765
views
creating a subset of a BLAST database
blastdb_aliastool
blastn
blastdbcmd
blast
updated 10 months ago by
Ram
43k • written 21 months ago by
ashenflower
▴ 30
0
votes
0
replies
807
views
Krona is not finding the NCBI taxonomy IDs even after running updateTaxonomy.sh
metagenomics
kraken2
NCBI
taxonomy
krona
22 months ago by
ashenflower
▴ 30
0
votes
2
replies
1.3k
views
Duplicate headers In Sam File
sam
samtools
bwa
updated 10 months ago by
Ram
43k • written 2.3 years ago by
ashenflower
▴ 30
1
vote
0
replies
1.1k
views
Comment:
Comment: jellyfish count discrepancy between results obtained with and without -C optio
2.4 years ago by
ashenflower
▴ 30
5
votes
3
replies
1.1k
views
jellyfish count discrepancy between results obtained with and without -C option
counting
kmers
discrepancy
jellyfish
updated 2.3 years ago by
onestop_data
▴ 330 • written 2.4 years ago by
ashenflower
▴ 30
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