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from phased SNPs to haplotype blocks (or phase sets)
eagle2 statistical phasing haplotype block
updated 3.2 years ago by ▴ 200 • written 4.5 years ago by ▴ 500
0
votes
1
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2.3k
views
Get the read count per genomic bin for each 10x barcode (10x Genomics Single Cell Gene Expression protocol)
RNA-Seq 10x genomics cell ranger bam read count
5.1 years ago by Nicola Casiraghi ▴ 500
9
votes
6
replies
4.8k
views
BICseq R package problem
BICseq CNV R WGS
updated 19 months ago by 43k • written 9.8 years ago by ▴ 500
6
votes
8
replies
3.2k
views
From genomic coordinate to Reference base
genome
updated 2.1 years ago by 43k • written 9.3 years ago by ▴ 500
5
votes
3
replies
2.7k
views
manage huge arrays in R
R ff memory usage
updated 8.1 years ago by 27k • written 8.1 years ago by ▴ 500
3
votes
3
replies
8.3k
views
EOF marker is absent in merged bam file
genome sequence-alignment next-gen-sequencing
updated 20 months ago by 43k • written 8.7 years ago by ▴ 500
7
votes
5
replies
4.3k
views
The importance of LB field in @RG tag for BreakDancer analysis
WGS BreakDancer LB RG
updated 2.3 years ago by 43k • written 9.6 years ago by ▴ 500
7
votes
9
replies
12k
views
problems in hg19 and b37 compatibility
b37 annotation hg19
updated 9 months ago by ▴ 100 • written 9.9 years ago by ▴ 500
2
votes
4
replies
4.3k
views
How to compute MAPQ distribution with Rsamtools
MAPQ Rsamtools BAM
updated 2.6 years ago by 43k • written 10.0 years ago by ▴ 500
2
votes
6
replies
3.9k
views
Hiseq Analysis Software Alignment
illumina fastq
updated 10.1 years ago by 100k • written 10.1 years ago by ▴ 500
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