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Comment: C: TopHat paramertes " -G/--GTF <GTF/GFF3 file>
updated 5.8 years ago by 45k • written 11.5 years ago by ▴ 240
0
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1
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10k
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Comment: C: What is the difference between refrence genome and annotation ?
updated 5.8 years ago by 45k • written 11.5 years ago by ▴ 240
0
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1
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10k
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Comment: C: What is the difference between refrence genome and annotation ?
updated 5.8 years ago by 45k • written 11.5 years ago by ▴ 240
0
votes
1
reply
11k
views
Comment: C: TopHat paramertes " -G/--GTF <GTF/GFF3 file>
updated 6.0 years ago by 45k • written 11.5 years ago by ▴ 240
10
votes
5
replies
6.7k
views
how to calculate the number of chromosomes in the human annotation GTF file using Linux command?
RNA-Seq
updated 4.1 years ago by 45k • written 11.5 years ago by ▴ 240
5
votes
1
reply
5.0k
views
Is there any differences between Human Genome downloaded from UCSC website and the on from Ensembl
ensembl next-gen RNA-Seq genome UCSC
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 240
0
votes
4
replies
4.4k
views
What causes this message in IGV?
next-gen-sequencing RNA-Seq
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 240
0
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1
reply
4.4k
views
Comment: Comment: What causes this message in IGV?
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 240
2
votes
1
reply
4.3k
views
What are the human and mouse reference genome (hg19, mm9) based on IGV?
rna-seq next-gen sequencing genome
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 240
0
votes
1
reply
3.8k
views
Comment: C: Error in IGV "Cannot find feature or locus: RP11-571E6.3"
10.9 years ago by Y Tb ▴ 240
1
vote
3
replies
3.8k
views
Error in IGV "Cannot find feature or locus: RP11-571E6.3"
next-gen-sequencing rna-seq
updated 3.6 years ago by 45k • written 10.9 years ago by ▴ 240
0
votes
2
replies
4.5k
views
How to create a genome from hg19.fa file and GTF file from ensembl to be use to visualize mapped data from tophat in IGV?
rna-seq next-gen
10.9 years ago by Y Tb ▴ 240
23
votes
9
replies
34k
views
Strand-specific vs. non-strand-specific RNAseq
next-gen strand-specific RNA-Seq
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 240
0
votes
0
replies
34k
views
Comment: Comment: Strand-specific vs. non-strand-specific RNAseq
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 240
0
votes
1
reply
34k
views
Comment: Comment: Strand-specific vs. non-strand-specific RNAseq
updated 3.8 years ago by 45k • written 11.1 years ago by ▴ 240
1
vote
5
replies
11k
views
TopHat paramertes " -G/--GTF <GTF/GFF3 file>
RNA-Seq next-gen
updated 4.1 years ago by 45k • written 11.5 years ago by ▴ 240
0
votes
1
reply
10k
views
Comment: C: What is the difference between refrence genome and annotation ?
11.5 years ago by Y Tb ▴ 240
24
votes
4
replies
45k
views
What is the difference between GTF AND GFF format
RNA-Seq
updated 11.5 years ago by ▴ 160 • written 11.5 years ago by ▴ 240
0
votes
1
reply
10k
views
Comment: C: What is the difference between refrence genome and annotation ?
11.5 years ago by Y Tb ▴ 240
2
votes
9
replies
10k
views
What is the difference between refrence genome and annotation ?
RNA-Seq next-gen
updated 11.5 years ago by ▴ 280 • written 11.5 years ago by ▴ 240
2
votes
6
replies
3.1k
views
I Am Looking For Any Document About The Basic Analysis Of Long Non-Coding Rna
updated 11.5 years ago by ▴ 570 • written 11.5 years ago by ▴ 240
0
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0
replies
3.1k
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Comment: C: I Am Looking For Any Document About The Basic Analysis Of Long Non-Coding Rna
11.5 years ago by Y Tb ▴ 240
0
votes
1
reply
3.1k
views
Comment: C: I Am Looking For Any Document About The Basic Analysis Of Long Non-Coding Rna
11.5 years ago by Y Tb ▴ 240
0
votes
1
reply
3.7k
views
Comment: C: What Is The Imprtant Information In The Cufflinks Output Folder
11.5 years ago by Y Tb ▴ 240
0
votes
2
replies
3.7k
views
Comment: C: What Is The Imprtant Information In The Cufflinks Output Folder
11.5 years ago by Y Tb ▴ 240
0
votes
1
reply
3.7k
views
Comment: C: What Is The Imprtant Information In The Cufflinks Output Folder
11.5 years ago by Y Tb ▴ 240
0
votes
8
replies
3.7k
views
What Is The Imprtant Information In The Cufflinks Output Folder
cufflinks output
updated 11.5 years ago by ★ 2.7k • written 11.5 years ago by ▴ 240
0
votes
0
replies
5.1k
views
Comment: Comment: How To Get Full Information About Rna-Seq File?
updated 4.5 years ago by 45k • written 11.5 years ago by ▴ 240
0
votes
0
replies
3.4k
views
Comment: C: How To Set/Choose The Best Parameter For Fastq_Quality_Trimmer?
11.5 years ago by Y Tb ▴ 240
0
votes
1
reply
5.1k
views
Comment: Comment: How To Get Full Information About Rna-Seq File?
updated 4.5 years ago by 45k • written 11.5 years ago by ▴ 240
0
votes
1
reply
4.0k
views
Comment: C: Details About Fastqc Programs Results (Modules).
11.5 years ago by Y Tb ▴ 240
5
votes
9
replies
4.0k
views
Details About Fastqc Programs Results (Modules).
fastqc
updated 11.5 years ago by ★ 7.8k • written 11.5 years ago by ▴ 240
0
votes
0
replies
4.0k
views
Comment: C: Details About Fastqc Programs Results (Modules).
11.5 years ago by Y Tb ▴ 240
3
votes
3
replies
3.4k
views
How To Set/Choose The Best Parameter For Fastq_Quality_Trimmer?
11.5 years ago by Y Tb ▴ 240
1
vote
0
replies
4.0k
views
Comment: C: Details About Fastqc Programs Results (Modules).
11.5 years ago by Y Tb ▴ 240
0
votes
1
reply
4.0k
views
Comment: C: Details About Fastqc Programs Results (Modules).
11.5 years ago by Y Tb ▴ 240
0
votes
11
replies
5.1k
views
How To Get Full Information About Rna-Seq File?
rna-seq
updated 4.5 years ago by 45k • written 11.5 years ago by ▴ 240
0
votes
0
replies
5.1k
views
Comment: Comment: How To Get Full Information About Rna-Seq File?
updated 4.5 years ago by 45k • written 11.5 years ago by ▴ 240
0
votes
1
reply
5.1k
views
Comment: Comment: How To Get Full Information About Rna-Seq File?
updated 4.5 years ago by 45k • written 11.5 years ago by ▴ 240
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