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Comment: Comment: How to convert and annotate apt-probeset-genotype into PLINK format
4 months ago by tvibhaps • 0
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How to create AffymetrixSuite file for using it in apt-format-result tool?
APT CallCode Genotype BaseCall
updated 5 months ago by 43k • written 5 months ago by • 0
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How to generate .map and .ped files (plink format for further analysis) from callcode files (APT) ? or else?
APT PLINK PED MAP
5 months ago by tvibhaps • 0
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Apt-format-result provides .map file (for exporting plink format) with all null values except affymetrix id column
APT plink
updated 5 months ago by 43k • written 5 months ago by • 0
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758
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Comment: Comment: Genecount-difference between HT-seq count, RSEM, and Kallisto
11 months ago by tvibhaps • 0
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2
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758
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Genecount-difference between HT-seq count, RSEM, and Kallisto
Kallisto RSEM RNAseq HTseqcount TPM
11 months ago by tvibhaps • 0
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2
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1.3k
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Comment: Comment: tx2gene.txt : transcript-to-gene mapping file
updated 11 months ago by 100k • written 11 months ago by • 0
2
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4
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1.3k
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tx2gene.txt : transcript-to-gene mapping file
tx2gene mapping
updated 11 months ago by 100k • written 11 months ago by • 0
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2
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563
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Quality_control_snpchip_analysis_50K_96K
cdffile AxiomAnalysisSoftware snpchip96K snpchip50k
updated 19 months ago by 141k • written 19 months ago by • 0
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1
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563
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Answer: Answer: Quality_control_snpchip_analysis_50K_96K
19 months ago by tvibhaps • 0
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1
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2.2k
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Comment: Comment: for paired-end unmapped reads after star mapping
19 months ago by tvibhaps • 0
0
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1
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2.2k
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Comment: Comment: for paired-end unmapped reads after star mapping
19 months ago by tvibhaps • 0
0
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1
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2.2k
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Comment: Comment: for paired-end unmapped reads after star mapping
19 months ago by tvibhaps • 0
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1
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2.2k
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Comment: Comment: for paired-end unmapped reads after star mapping
updated 19 months ago by 141k • written 19 months ago by • 0
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9
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2.2k
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for paired-end unmapped reads after star mapping
STAR-mapping Trinity assembly unmapped-reads
updated 19 months ago by 141k • written 19 months ago by • 0
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419
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Assembling unmapped reads of 3' 10X data
10Xreads Assemble scRNA unmapped Extract
24 months ago by tvibhaps • 0
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0
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734
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Comment: Comment: Decipher 3' 10X paired-end reads
24 months ago by tvibhaps • 0
0
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1
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734
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Comment: Comment: Decipher 3' 10X paired-end reads
24 months ago by tvibhaps • 0
0
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4
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734
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Decipher 3' 10X paired-end reads
umi barcode
24 months ago by tvibhaps • 0
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1.5k
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Comment: Comment: STARsolo mapping for paired-ended 3' 10X reads
24 months ago by tvibhaps • 0
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1.5k
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Comment: Comment: STARsolo mapping for paired-ended 3' 10X reads
24 months ago by tvibhaps • 0
0
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7
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1.5k
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STARsolo mapping for paired-ended 3' 10X reads
mapping scRNA STARsolo
updated 24 months ago by 141k • written 24 months ago by • 0
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1
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1.5k
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Comment: Comment: STARsolo mapping for paired-ended 3' 10X reads
24 months ago by tvibhaps • 0
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