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questions
0
votes
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replies
258
views
How to create AffymetrixSuite file for using it in apt-format-result tool?
APT
CallCode
Genotype
BaseCall
updated 5 months ago by
Ram
43k • written 5 months ago by
tvibhaps
• 0
0
votes
0
replies
376
views
How to generate .map and .ped files (plink format for further analysis) from callcode files (APT) ? or else?
APT
PLINK
PED
MAP
6 months ago by
tvibhaps
• 0
0
votes
0
replies
1.1k
views
Apt-format-result provides .map file (for exporting plink format) with all null values except affymetrix id column
APT
plink
updated 6 months ago by
Ram
43k • written 6 months ago by
tvibhaps
• 0
0
votes
2
replies
790
views
Genecount-difference between HT-seq count, RSEM, and Kallisto
Kallisto
RSEM
RNAseq
HTseqcount
TPM
12 months ago by
tvibhaps
• 0
2
votes
4
replies
1.3k
views
tx2gene.txt : transcript-to-gene mapping file
tx2gene
mapping
updated 12 months ago by
Istvan Albert
100k • written 12 months ago by
tvibhaps
• 0
1
vote
2
replies
587
views
Quality_control_snpchip_analysis_50K_96K
cdffile
AxiomAnalysisSoftware
snpchip96K
snpchip50k
updated 19 months ago by
GenoMax
142k • written 19 months ago by
tvibhaps
• 0
6
votes
9
replies
2.2k
views
for paired-end unmapped reads after star mapping
STAR-mapping
Trinity
assembly
unmapped-reads
updated 20 months ago by
GenoMax
142k • written 20 months ago by
tvibhaps
• 0
0
votes
0
replies
427
views
Assembling unmapped reads of 3' 10X data
10Xreads
Assemble
scRNA
unmapped
Extract
2.0 years ago by
tvibhaps
• 0
0
votes
4
replies
754
views
Decipher 3' 10X paired-end reads
umi
barcode
2.0 years ago by
tvibhaps
• 0
0
votes
7
replies
1.6k
views
STARsolo mapping for paired-ended 3' 10X reads
mapping
scRNA
STARsolo
updated 2.0 years ago by
GenoMax
142k • written 2.0 years ago by
tvibhaps
• 0
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