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Comment: Comment: can not find certain genes: Ensembl_Gene_Id To Entrezgene using Biomart
22 months ago by catherine ▴ 250
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1
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1.1k
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Comment: Comment: can not find certain genes: Ensembl_Gene_Id To Entrezgene using Biomart
22 months ago by catherine ▴ 250
0
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0
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1.1k
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Comment: Comment: can not find certain genes: Ensembl_Gene_Id To Entrezgene using Biomart
22 months ago by catherine ▴ 250
0
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7
replies
1.1k
views
can not find certain genes: Ensembl_Gene_Id To Entrezgene using Biomart
gene R Biomart ID
updated 22 months ago by 141k • written 22 months ago by ▴ 250
0
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2
replies
2.9k
views
how to merge a subset dataset back to master seurat object
scRNA RNAseq
updated 2.8 years ago by ★ 16k • written 2.8 years ago by ▴ 250
2
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0
replies
826
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resampling RNA-seq and sample size
RNA-Seq gene omics
3.4 years ago by catherine ▴ 250
0
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1
reply
52k
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Comment: C: How Can I Convert Bam/Sam To Wiggle
updated 5.5 years ago by 43k • written 9.0 years ago by ▴ 250
50
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18
replies
32k
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16 follow
extract only geneID and gene symbol from GTF file
gtf python genome
updated 14 months ago by 43k • written 9.0 years ago by ▴ 250
0
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1
reply
1.6k
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linear regression on EPICmethylation data
methylation R edgeR
updated 6.7 years ago by ★ 1.2k • written 6.7 years ago by ▴ 250
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0
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2.0k
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Comment: C: methylation probe numbers
6.8 years ago by catherine ▴ 250
2
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4
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2.0k
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methylation probe numbers
next-gen Assembly methylationEPIC
updated 6.8 years ago by 6.5k • written 6.8 years ago by ▴ 250
3
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5
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4.4k
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TSS file for D.melanogaster
tss drosophila
updated 2.4 years ago by 43k • written 9.8 years ago by ▴ 250
1
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1
reply
5.3k
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macs2 output-narrowpeak file understanding?
ChIP-Seq macs
updated 22 months ago by 43k • written 9.0 years ago by ▴ 250
12
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2
replies
7.8k
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how to know the strands of MACS call peaks
ChIP-Seq macs homer
updated 22 months ago by 43k • written 9.0 years ago by ▴ 250
0
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0
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52k
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Answer: A: How Can I Convert Bam/Sam To Wiggle
9.0 years ago by catherine ▴ 250
0
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1
reply
93k
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Comment: C: merge large amount of fastq files into a single one
9.1 years ago by catherine ▴ 250
56
votes
11
replies
93k
views
8 follow
merge large amount of fastq files into a single one
ChIP-Seq fastq
updated 23 months ago by 43k • written 9.1 years ago by ▴ 250
0
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1
reply
4.0k
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cuffcompare error: cannot locate input file
cufflinks RNA-Seq
updated 23 months ago by 43k • written 9.2 years ago by ▴ 250
0
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5
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6.6k
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ERROR on tophat: Mapping left_kept_reads to genome Athaliana with Bowtie2
tophat RNA-Seq
updated 24 months ago by 43k • written 9.2 years ago by ▴ 250
0
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0
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6.6k
views
Answer: Answer: ERROR on tophat: Mapping left_kept_reads to genome Athaliana with Bowtie2
updated 24 months ago by 43k • written 9.2 years ago by ▴ 250
0
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0
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6.6k
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Comment: C: ERROR on tophat: Mapping left_kept_reads to genome Athaliana with Bowtie2
9.2 years ago by catherine ▴ 250
0
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0
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6.6k
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Comment: C: ERROR on tophat: Mapping left_kept_reads to genome Athaliana with Bowtie2
9.2 years ago by catherine ▴ 250
0
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1
reply
2.8k
views
MAnorm error: unable to open files
ChIP-Seq
updated 3.0 years ago by 43k • written 9.4 years ago by ▴ 250
0
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6
replies
5.7k
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normalize on chip-seq data
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updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 250
0
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1
reply
3.1k
views
Comment: Comment: How and Where can I get the reference genome to run bowtie ?
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 250
0
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3
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3.1k
views
How and Where can I get the reference genome to run bowtie ?
ChIP-Seq
updated 2.1 years ago by 43k • written 9.4 years ago by ▴ 250
0
votes
2
replies
4.4k
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gene IDs not recognized by DAVID
gene GO-term
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 250
0
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1
reply
5.7k
views
Comment: Comment: normalize on chip-seq data
updated 2.2 years ago by 43k • written 9.4 years ago by ▴ 250
0
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0
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5.7k
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Comment: C: normalize on chip-seq data
9.4 years ago by catherine ▴ 250
1
vote
1
reply
2.1k
views
bed file run macs error
ChIP-Seq macs
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 250
6
votes
7
replies
2.6k
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Errors with sort-bed
ChIP-Seq bedops
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 250
0
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0
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2.6k
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Comment: Comment: Errors with sort-bed
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 250
0
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0
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2.6k
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Comment: C: Errors with sort-bed
9.5 years ago by catherine ▴ 250
0
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1
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2.6k
views
Comment: C: Errors with sort-bed
9.5 years ago by catherine ▴ 250
3
votes
1
reply
2.4k
views
visualize tiling array file to IGB
microarray genome igb
updated 2.2 years ago by 43k • written 9.5 years ago by ▴ 250
0
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0
replies
2.1k
views
how to use peaksplitter via macs
ChIP-Seq MACS
updated 2.3 years ago by 43k • written 9.7 years ago by ▴ 250
4
votes
5
replies
5.6k
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how to install macs and use it
ChIP-Seq
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 250
1
vote
1
reply
3.5k
views
BSgenome format error in subseq()
R
updated 2.4 years ago by 43k • written 9.7 years ago by ▴ 250
0
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0
replies
4.4k
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Comment: C: TSS file for D.melanogaster
9.8 years ago by catherine ▴ 250
0
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0
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4.4k
views
Comment: C: TSS file for D.melanogaster
9.8 years ago by catherine ▴ 250
1
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1
reply
4.2k
views
how to do vmatchPattern() for DNAStringSet [edited]
R
updated 2.6 years ago by 43k • written 10.0 years ago by ▴ 250
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