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1
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1.1k
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Comment: C: Extraction of information from stringtie output for selected gene ids
4.2 years ago by marina.v.yurieva ▴ 580
3
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0
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1.0k
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Data integration tools for multi-omics sequencing data
RNA-Seq ChIP-Seq sequencing next-gen
4.2 years ago by marina.v.yurieva ▴ 580
3
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2
replies
2.5k
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StringTie --merge creates the same id for neighbouring genes
stringtie ensembl gene assembly
updated 4.0 years ago by • 0 • written 5.8 years ago by ▴ 580
0
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1
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2.9k
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Answer: A: Retriving the base and its quality from fastq file
updated 5.4 years ago by 45k • written 9.3 years ago by ▴ 580
0
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1
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4.7k
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Answer: A: Best way to generate rarefaction curves from 16S/18S data-reclustering?
updated 5.4 years ago by 45k • written 9.3 years ago by ▴ 580
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0
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5.6k
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Comment: C: Bioinformatics project for a beginner
updated 5.4 years ago by 45k • written 9.4 years ago by ▴ 580
0
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1
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2.6k
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Answer: A: Simulating single end reads with dwgsim
updated 5.4 years ago by 45k • written 9.4 years ago by ▴ 580
0
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0
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2.6k
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Answer: A: 16S rRNA micobiome project: Which primers to use?
updated 5.5 years ago by 45k • written 9.7 years ago by ▴ 580
0
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0
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2.6k
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Answer: A: Query Regarding 454 paired end Metagenomic Data
updated 5.5 years ago by 45k • written 9.9 years ago by ▴ 580
1
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1
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2.5k
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Comment: C: Merge indel VCF files
updated 5.5 years ago by 45k • written 10.4 years ago by ▴ 580
0
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1
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1.4k
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Comment: C: Stringtie --merge with PE and SE files
5.8 years ago by marina.v.yurieva ▴ 580
0
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3
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1.4k
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Stringtie --merge with PE and SE files
assembly bam
5.8 years ago by marina.v.yurieva ▴ 580
0
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0
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3.2k
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Comment: C: Gene(s) withTpm value(s) zero in kallisto though reads are mapped
6.7 years ago by marina.v.yurieva ▴ 580
1
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0
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3.6k
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Comment: C: Stranded RNA-seq data visualization in UCSC
6.7 years ago by marina.v.yurieva ▴ 580
0
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0
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3.3k
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Comment: C: bedGraph compress tools
6.7 years ago by marina.v.yurieva ▴ 580
0
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1
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3.6k
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Comment: C: Stranded RNA-seq data visualization in UCSC
6.7 years ago by marina.v.yurieva ▴ 580
0
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1
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3.6k
views
Comment: C: Stranded RNA-seq data visualization in UCSC
6.7 years ago by marina.v.yurieva ▴ 580
7
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8
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3.6k
views
Stranded RNA-seq data visualization in UCSC
RNA-Seq stranded visualization bedgraph
updated 6.7 years ago by 7.1k • written 6.7 years ago by ▴ 580
0
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1
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2.7k
views
Comment: C: Problems uploading custom track to UCSC Genome Browser
6.7 years ago by marina.v.yurieva ▴ 580
1
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0
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2.5k
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Comment: C: hg38 gtf file containing all RNAs and features
6.7 years ago by marina.v.yurieva ▴ 580
0
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2
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2.7k
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Comment: C: Problems uploading custom track to UCSC Genome Browser
6.7 years ago by marina.v.yurieva ▴ 580
0
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0
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2.5k
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Comment: C: hg38 gtf file containing all RNAs and features
6.7 years ago by marina.v.yurieva ▴ 580
2
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0
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7.9k
views
Answer: C: extract only rows eith numbers?
6.7 years ago by marina.v.yurieva ▴ 580
0
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1
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2.7k
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Comment: C: Problems uploading custom track to UCSC Genome Browser
6.7 years ago by marina.v.yurieva ▴ 580
1
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0
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10k
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Comment: C: Mapping vs Quasi-Mapping
6.7 years ago by marina.v.yurieva ▴ 580
0
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0
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3.3k
views
Comment: C: bedGraph compress tools
6.7 years ago by marina.v.yurieva ▴ 580
0
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1
reply
3.3k
views
Comment: C: bedGraph compress tools
6.7 years ago by marina.v.yurieva ▴ 580
0
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0
replies
3.3k
views
Comment: C: bedGraph compress tools
6.7 years ago by marina.v.yurieva ▴ 580
1
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8
replies
3.3k
views
bedGraph compress tools
bedtools bedGraph
6.7 years ago by marina.v.yurieva ▴ 580
0
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0
replies
1.3k
views
Comment: C: RNA seq with edge R
6.8 years ago by marina.v.yurieva ▴ 580
0
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0
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42k
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Comment: C: How to know that your RNA-seq is stranded or not?
6.8 years ago by marina.v.yurieva ▴ 580
0
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0
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7.5k
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Comment: C: What kind of distribution to you expect to see for RNA-Seq expression levels?
6.8 years ago by marina.v.yurieva ▴ 580
1
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4
replies
2.0k
views
Combining two databases in gtf file, bedtools gives wierd result
bedtools gtf noncode
updated 6.8 years ago by 20 • written 6.8 years ago by ▴ 580
0
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0
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2.0k
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Comment: C: Combining two databases in gtf file, bedtools gives wierd result
6.8 years ago by marina.v.yurieva ▴ 580
0
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1
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2.0k
views
Comment: C: Combining two databases in gtf file, bedtools gives wierd result
6.8 years ago by marina.v.yurieva ▴ 580
3
votes
2
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12k
views
Answer: Answer: RNASeq user experience with Novogene?
updated 2.4 years ago by 45k • written 6.8 years ago by ▴ 580
0
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0
replies
14k
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Comment: A: Gene names in Ballgown differential expression analysis
8.5 years ago by marina.v.yurieva ▴ 580
2
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4
replies
3.9k
views
Counts from cuffdiff VS featurecounts
RNA-Seq cufflinks counts
updated 8.6 years ago by 12k • written 8.6 years ago by ▴ 580
0
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1
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3.9k
views
Comment: C: Counts from cuffdiff VS featurecounts
8.6 years ago by marina.v.yurieva ▴ 580
3
votes
1
reply
2.4k
views
InterPro Scan error with nucleotide sequences
sequence domain database
updated 8.6 years ago by ★ 2.3k • written 8.6 years ago by ▴ 580
0
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0
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1.9k
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Comment: C: Tophat/Cufflinks for stranded RNA-seq data
8.7 years ago by marina.v.yurieva ▴ 580
1
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2
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1.9k
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Tophat/Cufflinks for stranded RNA-seq data
RNA-Seq
updated 8.7 years ago by 105k • written 8.7 years ago by ▴ 580
0
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0
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8.6k
views
Answer: A: Bioinformatics and wet lab science combined
9.8 years ago by marina.v.yurieva ▴ 580
0
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1
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2.4k
views
Comment: C: NCBI FASTA files are a bit crazy
9.8 years ago by marina.v.yurieva ▴ 580
0
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2
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2.2k
views
Answer: Answer: Segmentation fault for Igblastn with species human
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 580
1
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0
replies
5.4k
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Answer: Answer: Metagenome raw data download
updated 3.0 years ago by 45k • written 9.9 years ago by ▴ 580
1
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0
replies
6.1k
views
Answer: Answer: Can you pool individuals to make 1 biological replicate?
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 580
0
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1
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6.2k
views
Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 580
0
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1
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6.2k
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Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 2.3 years ago by 45k • written 9.9 years ago by ▴ 580
0
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1
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6.2k
views
Comment: C: metagenomics of gut sequences
9.9 years ago by marina.v.yurieva ▴ 580
113 results • Page 1 of 3
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