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Comment: Comment: How to use CAFE from Orthofinder Results
18 days ago by san96 ▴ 190
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991
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Comment: Comment: Parameters for annotation with maker
12 weeks ago by san96 ▴ 190
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991
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Comment: Comment: Parameters for annotation with maker
7 months ago by san96 ▴ 190
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4
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991
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Parameters for annotation with maker
Maker masking plant annotation
12 weeks ago by san96 ▴ 190
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
7 months ago by san96 ▴ 190
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
7 months ago by san96 ▴ 190
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1
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
7 months ago by san96 ▴ 190
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0
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879
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Comment: Comment: bioinformatics tutorial on Oxford
8 months ago by san96 ▴ 190
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854
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Answer: Answer: How to plot PCA for DEGs
8 months ago by san96 ▴ 190
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2.8k
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Comment: Comment: ORA with clusterProfiler
8 months ago by san96 ▴ 190
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2
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2.8k
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Comment: Comment: ORA with clusterProfiler
8 months ago by san96 ▴ 190
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1
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2.8k
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Comment: Comment: ORA with clusterProfiler
8 months ago by san96 ▴ 190
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2
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793
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Plant diploid genome, phashed, CLR reads, PECAT
diploid genome Phased
9 months ago by san96 ▴ 190
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793
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Answer: Answer: Plant diploid genome, phashed, CLR reads, PECAT
9 months ago by san96 ▴ 190
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0
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793
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Comment: Comment: Plant diploid genome, phashed, CLR reads, PECAT
9 months ago by san96 ▴ 190
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1
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783
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Comment: Comment: MAKER has many FAILED
11 months ago by san96 ▴ 190
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3
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783
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MAKER has many FAILED
genome softmask MAKER annotation
updated 11 months ago by 153k • written 11 months ago by ▴ 190
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4.8k
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Comment: Comment: Status of maker annotation
11 months ago by san96 ▴ 190
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1
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4.8k
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Comment: Comment: Status of maker annotation
12 months ago by san96 ▴ 190
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1
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524
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Maker genome softmask
Maker genome softmask plant
updated 12 months ago by ★ 1.3k • written 12 months ago by ▴ 190
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0
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353
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RepeatMasker without DNA transposons, satellites and SINEs
transposons DNA RepeatModeler RepeatMasker
14 months ago by san96 ▴ 190
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0
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868
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Comment: Comment: SPADES output
14 months ago by san96 ▴ 190
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2
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868
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SPADES output
contigs scaffolds output SPADES
14 months ago by san96 ▴ 190
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2.6k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
14 months ago by san96 ▴ 190
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2.6k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
14 months ago by san96 ▴ 190
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0
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2.6k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
14 months ago by san96 ▴ 190
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1
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2.6k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
15 months ago by san96 ▴ 190
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1
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2.6k
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Answer: Answer: Basic guidance on Using 10x Genomics Data for De Novo Assembly
15 months ago by san96 ▴ 190
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0
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1.3k
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Comment: Comment: About runing Pilon on individual chromosomes when polish draft genome assembly
16 months ago by san96 ▴ 190
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0
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550
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Comment: Comment: Polish a large genome with Pilon
16 months ago by san96 ▴ 190
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1
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550
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Polish a large genome with Pilon
Pilon Pacbio Polish Illumina
16 months ago by san96 ▴ 190
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0
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1.8k
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Comment: Comment: Longest transcript variant per gene
16 months ago by san96 ▴ 190
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0
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1.8k
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Comment: Comment: Longest transcript variant per gene
16 months ago by san96 ▴ 190
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1.8k
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Comment: Comment: Longest transcript variant per gene
16 months ago by san96 ▴ 190
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1.8k
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Comment: Comment: Longest transcript variant per gene
16 months ago by san96 ▴ 190
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7
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1.8k
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Longest transcript variant per gene
transcript longest variant orthofinder
16 months ago by san96 ▴ 190
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0
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1.7k
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Comment: Comment: Perfom a Gene Ontology Analysis from GO terms txt file
16 months ago by san96 ▴ 190
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1
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1.7k
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Answer: Answer: Perfom a Gene Ontology Analysis from GO terms txt file
16 months ago by san96 ▴ 190
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1
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1.7k
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Comment: Comment: Perfom a Gene Ontology Analysis from GO terms file
16 months ago by san96 ▴ 190
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0
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323
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Analysis of the gene family of a genome.
Genome gene-family
updated 17 months ago by 45k • written 17 months ago by ▴ 190
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1
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929
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Comment: Comment: GSEA analysis in R
17 months ago by san96 ▴ 190
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0
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1.4k
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
17 months ago by san96 ▴ 190
1
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0
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2.7k
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Comment: Comment: BRAKER3 genome annotation
17 months ago by san96 ▴ 190
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1
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745
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Comment: Comment: RNAseq 1 control 2 different treatment
17 months ago by san96 ▴ 190
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1
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2.7k
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Comment: Comment: BRAKER3 genome annotation
17 months ago by san96 ▴ 190
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0
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1.0k
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Comment: Comment: Extracting information from gff3 file produced by augustus
17 months ago by san96 ▴ 190
1
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0
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668
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Answer: Answer: How do I identify gene duplication or paralogs in an annotated reference genome
17 months ago by san96 ▴ 190
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0
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3.1k
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Comment: Comment: KEGG analysis in R
17 months ago by san96 ▴ 190
2
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7
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3.1k
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KEGG analysis in R
KEGG clusterProfiler Zea-mays
updated 16 months ago by • 0 • written 17 months ago by ▴ 190
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1
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3.1k
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Comment: Comment: KEGG analysis in R
17 months ago by san96 ▴ 190
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