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Using ANNOVAR to identify variants falling within ALU elements
ANNOVAR
9 months ago by Aiswarya ▴ 20
1
vote
2
replies
881
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Deseq2 shows differential expression while TPM values are not significantly different
Deseq2 TPM
updated 20 months ago by ★ 1.9k • written 20 months ago by ▴ 20
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0
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1.5k
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Comment: Comment: Differential RNA editing using edgeR
21 months ago by Aiswarya ▴ 20
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1
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1.5k
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Comment: Comment: Differential RNA editing using edgeR
21 months ago by Aiswarya ▴ 20
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4
replies
1.5k
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Differential RNA editing using edgeR
editing RNA GLM
21 months ago by Aiswarya ▴ 20
1
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1
reply
684
views
Transcript count normalization using Deseq2
transcript DESeq2
updated 24 months ago by 89k • written 24 months ago by ▴ 20
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11
replies
2.6k
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Extracting regions around sites in VCF file and writing them as fasta sequences/files
VCF fasta
updated 2.1 years ago by 154k • written 2.2 years ago by ▴ 20
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1
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2.6k
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Comment: Comment: Extracting regions around sites in VCF file and writing them as fasta sequences/
2.2 years ago by Aiswarya ▴ 20
1
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1
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1.1k
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Annotate VCF with RepeatMasker
RepeatMasker VCF annotation
updated 2.2 years ago by ★ 2.5k • written 2.2 years ago by ▴ 20
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1
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2.1k
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Comment: Comment: Logistic regression on longitudinal data
2.2 years ago by Aiswarya ▴ 20
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3
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2.1k
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Logistic regression on longitudinal data
logistic-regression
updated 2.2 years ago by ★ 1.9k • written 2.2 years ago by ▴ 20
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1
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1.4k
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Stringtie prepDE.py script
deseq2 stringtie
updated 2.7 years ago by ★ 2.4k • written 2.7 years ago by ▴ 20
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