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1
vote
3
replies
321
views
Dimensionality reduction using RNA and protein expression
dimensionality-reduction RNA-seq spatial
updated 6 days ago by 4.8k • written 7 days ago by ▴ 20
0
votes
0
replies
486
views
Comment: Comment: Speed up umap parameter optimisation?
7 days ago by noodlejackson ▴ 20
0
votes
1
reply
486
views
Comment: Comment: Speed up umap parameter optimisation?
7 days ago by noodlejackson ▴ 20
3
votes
7
replies
486
views
Speed up umap parameter optimisation?
rna-seq umap r
updated 6 days ago by ★ 18k • written 9 days ago by ▴ 20
0
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0
replies
486
views
Comment: Comment: Speed up umap parameter optimisation?
9 days ago by noodlejackson ▴ 20
0
votes
0
replies
393
views
Comment: Comment: MT and rRNA gene expression in bulk RNA-seq sample QC filtering
5 weeks ago by noodlejackson ▴ 20
13
votes
7
replies
748
views
7 follow
Forum: Premade RNA-seq pipeline or custom
rna-seq pipeline
updated 5 weeks ago by 21k • written 5 weeks ago by ▴ 20
4
votes
2
replies
393
views
MT and rRNA gene expression in bulk RNA-seq sample QC filtering
RNA-seq
5 weeks ago by noodlejackson ▴ 20
1
vote
0
replies
848
views
Comment: Comment: Batch correction preserving biological difference
5 months ago by noodlejackson ▴ 20
0
votes
1
reply
848
views
Comment: Comment: Batch correction preserving biological difference
5 months ago by noodlejackson ▴ 20
4
votes
6
replies
848
views
Batch correction preserving biological difference
scRNA-Seq batch-correction
5 months ago by noodlejackson ▴ 20
0
votes
1
reply
848
views
Comment: Comment: Batch correction preserving biological difference
5 months ago by noodlejackson ▴ 20
2
votes
1
reply
420
views
Associations with small-ish patient clinical data with bulk RNA-seq expression
statistics ai rna-seq stats machine-learning
updated 7 months ago by ★ 2.1k • written 7 months ago by ▴ 20
0
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0
replies
13k
views
Comment: Comment: WGCNA soft thresholding problem
11 months ago by noodlejackson ▴ 20
1
vote
3
replies
878
views
GO, KEGG, GSEA analysis with ~5 DEGs
GO KEGG
updated 14 months ago by 102k • written 14 months ago by ▴ 20
0
votes
0
replies
878
views
Comment: Comment: GO, KEGG, GSEA analysis with ~5 DEGs
14 months ago by noodlejackson ▴ 20
0
votes
0
replies
1.3k
views
Comment: Comment: RNA-Seq: Comparing Expression between Cancer Grades
15 months ago by noodlejackson ▴ 20
7
votes
7
replies
1.3k
views
RNA-Seq: Comparing Expression between Cancer Grades
factors rna-seq grades transcriptomics
15 months ago by noodlejackson ▴ 20
1
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0
replies
1.3k
views
Comment: Comment: RNA-Seq: Comparing Expression between Cancer Grades
15 months ago by noodlejackson ▴ 20
0
votes
2
replies
1.3k
views
Comment: Comment: RNA-Seq: Comparing Expression between Cancer Grades
15 months ago by noodlejackson ▴ 20
0
votes
0
replies
927
views
Comment: Comment: Matched samples in Deseq2
18 months ago by noodlejackson ▴ 20
0
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1
reply
927
views
Comment: Comment: Matched samples in Deseq2
18 months ago by noodlejackson ▴ 20
0
votes
0
replies
1.1k
views
Comment: Comment: Heatmap in R; how to change the order of Row names
updated 18 months ago by 44k • written 18 months ago by ▴ 20
1
vote
4
replies
927
views
Matched samples in Deseq2
RNA-seq deseq2
18 months ago by noodlejackson ▴ 20
0
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0
replies
2.8k
views
Answer: Answer: How can I make all my PCA plots the same shape using ggplots?
22 months ago by noodlejackson ▴ 20
0
votes
0
replies
1.4k
views
Comment: Comment: No Replicate RNA-Seq (But still biological replicates)
22 months ago by noodlejackson ▴ 20
0
votes
0
replies
767
views
Comment: Comment: Do Benjamini-Hochberg p.adj values get less strict when analysing only one super
22 months ago by noodlejackson ▴ 20
1
vote
2
replies
767
views
Do Benjamini-Hochberg p.adj values get less strict when analysing only one superfamily only? RNA-seq
pvalue p-value rna-seq Benjamini-Hochberg
updated 22 months ago by 102k • written 22 months ago by ▴ 20
5
votes
4
replies
1.4k
views
No Replicate RNA-Seq (But still biological replicates)
replicates RNA-Seq
22 months ago by noodlejackson ▴ 20
0
votes
0
replies
808
views
Comment: Comment: Seeking feedback on RNA-seq analysis with low sample size and custom pathways
22 months ago by noodlejackson ▴ 20
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