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Comment: Comment: scRNASeq equal number of cells across conditions
4.4 years ago by TriS ★ 4.8k
2
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2
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2.8k
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scRNASeq equal number of cells across conditions
scRNAseq seurat
updated 4.4 years ago by 89k • written 4.4 years ago by ★ 4.8k
242
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176
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114k
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73 follow
Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
RNA-Seq Survival TCGA
updated 2.3 years ago by 45k • written 10.1 years ago by ★ 4.8k
5
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8
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8.9k
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visualize overlapping nodes in Cytoscape
cytoscape networks graph
updated 3.2 years ago by 45k • written 10.5 years ago by ★ 4.8k
1
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0
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17k
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Answer: A: Seurat "FindMarkers" and "FindallMarkers" v.s. Scanpy "rank_genes_groups"
5.1 years ago by TriS ★ 4.8k
2
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0
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3.1k
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Comment: C: logistic regression subset data
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 4.8k
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0
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1.8k
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Answer: A: identity the correlation between gene expression and estrogene
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 4.8k
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1
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 4.8k
0
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0
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 4.8k
3
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1
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4.9k
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Comment: C: Everything significant in Limma for Differential Expression
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 4.8k
1
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1
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 4.8k
0
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1
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2.3k
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Answer: A: About Dream Challenge Somatic Mutation Calling Algorithms
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 4.8k
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0
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Answer: A: RNA-seq study Looking for for Publicly Available Cancer and Virus FTP Databases
updated 5.7 years ago by 45k • written 9.7 years ago by ★ 4.8k
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0
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6.1k
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Comment: C: Volcano plot for multiple clusters
5.8 years ago by TriS ★ 4.8k
2
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2
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6.0k
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Answer: Answer: Creating a Venn Diagram from Microarray Data
updated 3.1 years ago by 45k • written 9.8 years ago by ★ 4.8k
2
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0
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6.3k
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Comment: C: Generating Gencode TSS file
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
1
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0
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10k
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Comment: C: pros- and cons- : programming skills vs. GUI
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
2
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1
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2.2k
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Answer: A: mRNA expression levels association
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
2
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1
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3.3k
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Answer: A: Bioinformatics course good for microbiology student or not?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
2
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1
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6.1k
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Answer: A: Volcano plot for multiple clusters
5.8 years ago by TriS ★ 4.8k
0
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0
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
5.8 years ago by TriS ★ 4.8k
1
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2
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3.2k
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Answer: A: How to compare these distributions?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
0
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1
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3.2k
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Comment: C: How to compare these distributions?
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
2
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1
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3.2k
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Answer: A: Searching Project in bioinformatics
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 4.8k
3
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2
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13k
views
Answer: Answer: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 2.5 years ago by 45k • written 9.8 years ago by ★ 4.8k
0
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1
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 4.8k
0
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2
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
0
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0
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13k
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Comment: C: Statistical test to compare two discrete distributions
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
0
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1
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3.5k
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Comment: C: breakdancer - cfg creation and chi square problem
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
3
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0
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
0
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0
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5.9k
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Comment: C: How to find duplicate values in two columns and move them to a third?
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
0
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2
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2.5k
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Answer: A: blasting a nucleotide query file (about 2000 seq) over a group of transcriptomes
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
0
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0
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2.7k
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Comment: C: indel position in repetitive regions
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 4.8k
0
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1
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2.9k
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Comment: C: Function in R/File: the most expressed genes.
updated 5.9 years ago by 45k • written 10.1 years ago by ★ 4.8k
0
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1
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
updated 5.9 years ago by 45k • written 10.1 years ago by ★ 4.8k
0
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1
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7.5k
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Answer: A: Using bowtie2 in parallel
updated 5.9 years ago by 45k • written 10.6 years ago by ★ 4.8k
1
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1
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5.0k
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Answer: C: Getting Started with Deconseq
updated 5.9 years ago by 45k • written 10.7 years ago by ★ 4.8k
0
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0
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2.3k
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Answer: A: Can I identify a cell type by comparison with published transcriptomes of known
updated 6.1 years ago by 89k • written 9.4 years ago by ★ 4.8k
16
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11
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16k
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7 follow
Tutorial: retrieve full TCGA datasets from cBioportal with R
TCGA RNA-seq data-retrieval cBioportal R
updated 2.5 years ago by 45k • written 8.9 years ago by ★ 4.8k
0
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0
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2.4k
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Answer: A: Oncotator Data Source
updated 6.4 years ago by 45k • written 9.8 years ago by ★ 4.8k
0
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0
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114k
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Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.4 years ago by TriS ★ 4.8k
0
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0
replies
114k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.4 years ago by TriS ★ 4.8k
0
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0
replies
114k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.4 years ago by TriS ★ 4.8k
0
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0
replies
114k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.4 years ago by TriS ★ 4.8k
0
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1
reply
114k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
6.4 years ago by TriS ★ 4.8k
2
votes
3
replies
2.8k
views
MACS usage for IgG and treatment
MACS ChIP-Seq normalization
updated 3.5 years ago by 45k • written 10.8 years ago by ★ 4.8k
0
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9
replies
4.5k
views
Sam file header and truncated file
sam samtools header
updated 7.3 years ago by • 0 • written 8.9 years ago by ★ 4.8k
2
votes
0
replies
114k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.6 years ago by TriS ★ 4.8k
0
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1
reply
114k
views
Comment: C: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
7.6 years ago by TriS ★ 4.8k
1
vote
0
replies
3.5k
views
Comment: C: How to visualize Proteome Networks
7.8 years ago by TriS ★ 4.8k
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