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Showing :
questions
0
votes
9
replies
362
views
Duplicated reads (IDs) from nanopore sequencing
bam
nanopore
sequencing
3 days ago by
njornet
▴ 20
0
votes
2
replies
193
views
Phasing a mixture of two individuals' DNA with long reads
long-reads
phasing
11 days ago by
njornet
▴ 20
0
votes
3
replies
264
views
Software to separate reads from different individuals
software
development
nanopore
updated 19 days ago by
GenoMax
142k • written 20 days ago by
njornet
▴ 20
0
votes
5
replies
433
views
Should I remove unlocalized scaffols in reference genome before alignment?
qualimap
alignment
minimap2
GRCh38
assembly
25 days ago by
njornet
▴ 20
4
votes
2
replies
380
views
Assume "yes" as the answer to any prompts with bioconda
docker
container
bioconda
updated 4 weeks ago by
Juke34
8.6k • written 4 weeks ago by
njornet
▴ 20
0
votes
2
replies
316
views
Bedmethyl file format
bedmethyl
methylation
updated 4 weeks ago by
GenoMax
142k • written 4 weeks ago by
njornet
▴ 20
2
votes
2
replies
274
views
Problem with Sniffles pipeline and SV calling help
SV
sniffles
StructuralVariant
updated 4 weeks ago by
GenoMax
142k • written 4 weeks ago by
njornet
▴ 20
0
votes
2
replies
215
views
fmols for nanopore library loading
nanopore
sequencing
libraryprep
fmol
LSK114
updated 5 weeks ago by
GenoMax
142k • written 5 weeks ago by
njornet
▴ 20
0
votes
4
replies
322
views
Adaptive sampling for whole chromosomes
T2T
Nanopore
AdaptiveSampling
aneuploidy
centromeres
5 weeks ago by
njornet
▴ 20
5
votes
14
replies
1.1k
views
Not getting any modification calls in nanopore reads with dorado basecaller
mofications
dorado
basecalling
nanopore
methylation
updated 5 weeks ago by
GenoMax
142k • written 8 weeks ago by
njornet
▴ 20
0
votes
2
replies
283
views
Weird Basecalled reads PHRED quality plot from pycoQC
pycoQC
nanopore
sequencing
9 weeks ago by
njornet
▴ 20
0
votes
0
replies
145
views
SAMstat mapping quality report MAPQ gt vs MAPQ lt
Sequencing
mapping
samstat
9 weeks ago by
njornet
▴ 20
3
votes
6
replies
639
views
Target deletions with adaptive sampling
microdeletions
nanopore
AdaptiveSampling
9 weeks ago by
njornet
▴ 20
1
vote
2
replies
281
views
Considerations for nanopore adaptive sampling enrichment designing
adaptive-sampling
nanopore
10 weeks ago by
njornet
▴ 20
1
vote
2
replies
590
views
Align dorado output to reference
minimap2
bam
nanopore
dorado
updated 10 weeks ago by
colindaven
6.4k • written 10 weeks ago by
njornet
▴ 20
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