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1
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10
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4.6k
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Bedmethyl file format
bedmethyl
methylation
updated 8 months ago by
lavigne
• 0 • written 18 months ago by
njornet
▴ 20
0
votes
0
replies
311
views
Is there a database with the mode of inheritance for diseases?
diagnostics
genotyping
allelotyping
11 months ago by
njornet
▴ 20
0
votes
1
reply
1.0k
views
Comment:
Comment: Where can I download a BED file with exonic regions?
11 months ago by
njornet
▴ 20
2
votes
4
replies
1.0k
views
Where can I download a BED file with exonic regions?
exome
bed
updated 11 months ago by
Pierre Lindenbaum
166k • written 11 months ago by
njornet
▴ 20
0
votes
1
reply
1.3k
views
Comment:
Comment: What does fully overlapping supplementary alignments mean?
12 months ago by
njornet
▴ 20
0
votes
3
replies
1.3k
views
What does fully overlapping supplementary alignments mean?
Alignment
nanopore
minimap2
updated 12 months ago by
Michael
56k • written 12 months ago by
njornet
▴ 20
0
votes
0
replies
434
views
Is this phasing result normal?
haplotyping
sequencing
phasing
nanopore
13 months ago by
njornet
▴ 20
0
votes
0
replies
830
views
Comment:
Comment: Restrictive alignment with minimap2
14 months ago by
njornet
▴ 20
0
votes
2
replies
830
views
Restrictive alignment with minimap2
nanopore
alignment
minimap2
14 months ago by
njornet
▴ 20
0
votes
4
replies
1.0k
views
Use alignment as reference genome to separate DNA from a mixed sample
human
sequencing
nanopore
alignment
updated 15 months ago by
GenoMax
154k • written 15 months ago by
njornet
▴ 20
0
votes
1
reply
1.0k
views
Comment:
Comment: Use alignment as reference genome to separate DNA from a mixed sample
15 months ago by
njornet
▴ 20
0
votes
0
replies
3.4k
views
Comment:
Comment: Duplicated reads (IDs) from nanopore sequencing
17 months ago by
njornet
▴ 20
0
votes
2
replies
3.4k
views
Comment:
Comment: Duplicated reads (IDs) from nanopore sequencing
17 months ago by
njornet
▴ 20
0
votes
9
replies
3.4k
views
Duplicated reads (IDs) from nanopore sequencing
bam
nanopore
sequencing
17 months ago by
njornet
▴ 20
0
votes
0
replies
724
views
Comment:
Comment: Phasing a mixture of two individuals' DNA with long reads
18 months ago by
njornet
▴ 20
0
votes
2
replies
724
views
Phasing a mixture of two individuals' DNA with long reads
long-reads
phasing
18 months ago by
njornet
▴ 20
0
votes
1
reply
800
views
Comment:
Comment: Software to separate reads from different individuals
18 months ago by
njornet
▴ 20
0
votes
3
replies
800
views
Software to separate reads from different individuals
software
development
nanopore
updated 18 months ago by
GenoMax
154k • written 18 months ago by
njornet
▴ 20
0
votes
0
replies
1.3k
views
Comment:
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
18 months ago by
njornet
▴ 20
0
votes
0
replies
1.3k
views
Comment:
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
18 months ago by
njornet
▴ 20
0
votes
5
replies
1.3k
views
Should I remove unlocalized scaffols in reference genome before alignment?
qualimap
alignment
minimap2
GRCh38
assembly
18 months ago by
njornet
▴ 20
4
votes
2
replies
1.4k
views
Assume "yes" as the answer to any prompts with bioconda
docker
container
bioconda
updated 18 months ago by
Juke34
9.3k • written 18 months ago by
njornet
▴ 20
2
votes
2
replies
1.0k
views
Problem with Sniffles pipeline and SV calling help
SV
sniffles
StructuralVariant
updated 18 months ago by
GenoMax
154k • written 18 months ago by
njornet
▴ 20
0
votes
1
reply
5.5k
views
Comment:
Comment: Not getting any modification calls in nanopore reads with dorado basecaller
18 months ago by
njornet
▴ 20
0
votes
1
reply
5.5k
views
Comment:
Comment: Not getting any modification calls in nanopore reads with dorado basecaller
18 months ago by
njornet
▴ 20
0
votes
0
replies
908
views
Comment:
Comment: fmols for nanopore library loading
18 months ago by
njornet
▴ 20
0
votes
0
replies
1.1k
views
Comment:
Comment: Adaptive sampling for whole chromosomes
18 months ago by
njornet
▴ 20
0
votes
1
reply
5.5k
views
Comment:
Comment: Not getting any modification calls in nanopore reads with dorado basecaller
18 months ago by
njornet
▴ 20
0
votes
2
replies
908
views
fmols for nanopore library loading
nanopore
sequencing
libraryprep
fmol
LSK114
updated 18 months ago by
GenoMax
154k • written 18 months ago by
njornet
▴ 20
0
votes
1
reply
1.1k
views
Comment:
Comment: Adaptive sampling for whole chromosomes
18 months ago by
njornet
▴ 20
0
votes
4
replies
1.1k
views
Adaptive sampling for whole chromosomes
T2T
Nanopore
AdaptiveSampling
aneuploidy
centromeres
18 months ago by
njornet
▴ 20
1
vote
1
reply
5.5k
views
Comment:
Comment: Not getting any modification calls in nanopore reads with dorado basecaller
18 months ago by
njornet
▴ 20
0
votes
0
replies
5.5k
views
Comment:
Comment: Not getting any modification calls in nanopore reads with dorado basecaller
18 months ago by
njornet
▴ 20
5
votes
14
replies
5.5k
views
Not getting any modification calls in nanopore reads with dorado basecaller
mofications
dorado
basecalling
nanopore
methylation
updated 18 months ago by
GenoMax
154k • written 19 months ago by
njornet
▴ 20
0
votes
1
reply
5.5k
views
Comment:
Comment: Not getting any modification calls in nanopore reads with dorado basecaller
19 months ago by
njornet
▴ 20
0
votes
0
replies
944
views
Comment:
Comment: Weird Basecalled reads PHRED quality plot from pycoQC
19 months ago by
njornet
▴ 20
0
votes
2
replies
944
views
Weird Basecalled reads PHRED quality plot from pycoQC
pycoQC
nanopore
sequencing
19 months ago by
njornet
▴ 20
0
votes
0
replies
501
views
SAMstat mapping quality report MAPQ gt vs MAPQ lt
Sequencing
mapping
samstat
19 months ago by
njornet
▴ 20
0
votes
0
replies
1.8k
views
Comment:
Comment: Target deletions with adaptive sampling
19 months ago by
njornet
▴ 20
1
vote
2
replies
1.8k
views
Comment:
Comment: Target deletions with adaptive sampling
19 months ago by
njornet
▴ 20
3
votes
6
replies
1.8k
views
Target deletions with adaptive sampling
microdeletions
nanopore
AdaptiveSampling
19 months ago by
njornet
▴ 20
0
votes
0
replies
969
views
Comment:
Comment: Considerations for nanopore adaptive sampling enrichment designing
20 months ago by
njornet
▴ 20
1
vote
2
replies
969
views
Considerations for nanopore adaptive sampling enrichment designing
adaptive-sampling
nanopore
20 months ago by
njornet
▴ 20
1
vote
2
replies
4.2k
views
Align dorado output to reference
minimap2
bam
nanopore
dorado
updated 20 months ago by
colindaven
8.0k • written 20 months ago by
njornet
▴ 20
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