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Comment: Comment: Phasing a mixture of two individuals' DNA with long reads
just now by njornet ▴ 20
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Phasing a mixture of two individuals' DNA with long reads
long-reads phasing
just now by njornet ▴ 20
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1
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224
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Comment: Comment: Software to separate reads from different individuals
8 days ago by njornet ▴ 20
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3
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224
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Software to separate reads from different individuals
software development nanopore
updated 8 days ago by 142k • written 8 days ago by ▴ 20
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396
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
14 days ago by njornet ▴ 20
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396
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
14 days ago by njornet ▴ 20
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5
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396
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Should I remove unlocalized scaffols in reference genome before alignment?
qualimap alignment minimap2 GRCh38 assembly
14 days ago by njornet ▴ 20
4
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2
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353
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Assume "yes" as the answer to any prompts with bioconda
docker container bioconda
updated 20 days ago by 8.6k • written 20 days ago by ▴ 20
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2
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280
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Bedmethyl file format
bedmethyl methylation
updated 20 days ago by 142k • written 21 days ago by ▴ 20
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2
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250
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Problem with Sniffles pipeline and SV calling help
SV sniffles StructuralVariant
updated 22 days ago by 142k • written 22 days ago by ▴ 20
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1.0k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
27 days ago by njornet ▴ 20
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1.0k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
27 days ago by njornet ▴ 20
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204
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Comment: Comment: fmols for nanopore library loading
27 days ago by njornet ▴ 20
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0
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300
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Comment: Comment: Adaptive sampling for whole chromosomes
27 days ago by njornet ▴ 20
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1.0k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
27 days ago by njornet ▴ 20
0
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2
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204
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fmols for nanopore library loading
nanopore sequencing libraryprep fmol LSK114
updated 27 days ago by 142k • written 28 days ago by ▴ 20
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1
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300
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Comment: Comment: Adaptive sampling for whole chromosomes
28 days ago by njornet ▴ 20
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4
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300
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Adaptive sampling for whole chromosomes
T2T Nanopore AdaptiveSampling aneuploidy centromeres
27 days ago by njornet ▴ 20
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1
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1.0k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
28 days ago by njornet ▴ 20
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0
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1.0k
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
28 days ago by njornet ▴ 20
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14
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1.0k
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Not getting any modification calls in nanopore reads with dorado basecaller
mofications dorado basecalling nanopore methylation
updated 26 days ago by 142k • written 6 weeks ago by ▴ 20
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Comment: Comment: Not getting any modification calls in nanopore reads with dorado basecaller
6 weeks ago by njornet ▴ 20
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257
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Comment: Comment: Weird Basecalled reads PHRED quality plot from pycoQC
7 weeks ago by njornet ▴ 20
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2
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257
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Weird Basecalled reads PHRED quality plot from pycoQC
pycoQC nanopore sequencing
7 weeks ago by njornet ▴ 20
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140
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SAMstat mapping quality report MAPQ gt vs MAPQ lt
Sequencing mapping samstat
8 weeks ago by njornet ▴ 20
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0
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610
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Comment: Comment: Target deletions with adaptive sampling
8 weeks ago by njornet ▴ 20
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2
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610
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Comment: Comment: Target deletions with adaptive sampling
8 weeks ago by njornet ▴ 20
3
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6
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610
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Target deletions with adaptive sampling
microdeletions nanopore AdaptiveSampling
8 weeks ago by njornet ▴ 20
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263
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Comment: Comment: Considerations for nanopore adaptive sampling enrichment designing
8 weeks ago by njornet ▴ 20
1
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2
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263
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Considerations for nanopore adaptive sampling enrichment designing
adaptive-sampling nanopore
8 weeks ago by njornet ▴ 20
1
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2
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527
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Align dorado output to reference
minimap2 bam nanopore dorado
updated 9 weeks ago by 6.4k • written 9 weeks ago by ▴ 20
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