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Showing :
questions
2
votes
7
replies
6.8k
views
Problems installing ete3 using conda
conda
ete3
updated 3.9 years ago by
heronoh
• 0 • written 7.2 years ago by
jyu429
▴ 120
0
votes
3
replies
1.7k
views
Finding all positions for all kmers belonging to a (not so short) list of kmers in a large genome
genome
sequencing
kmer
updated 5.2 years ago by
ATpoint
82k • written 5.2 years ago by
jyu429
▴ 120
0
votes
1
reply
1.3k
views
Download all files from encode matching filter specifications
Encode
updated 6.3 years ago by
Brian Gudenas
▴ 90 • written 6.4 years ago by
jyu429
▴ 120
2
votes
1
reply
2.5k
views
HapCUT2 using GATK results
phasing
hapcut2
gatk
vcf
updated 6.8 years ago by
lloydlow
▴ 20 • written 7.3 years ago by
jyu429
▴ 120
1
vote
3
replies
1.7k
views
Using ete3 without knowing tree topology
phylogenetic tree
ete3
updated 7.1 years ago by
Biostar
20 • written 7.2 years ago by
jyu429
▴ 120
3
votes
5
replies
1.9k
views
1000 genomes data fastq
1000genomes
updated 22 months ago by
Ram
43k • written 9.0 years ago by
jyu429
▴ 120
0
votes
1
reply
2.0k
views
GATK allele frequencies
GATK
allele frequency
updated 7.6 years ago by
vakul.mohanty
▴ 270 • written 7.6 years ago by
jyu429
▴ 120
3
votes
3
replies
1.6k
views
Paired end FASTA to single BAM file
samtools
updated 7.7 years ago by
igor
13k • written 7.7 years ago by
jyu429
▴ 120
4
votes
2
replies
1.8k
views
Substitute first column based on second column
awk
updated 24 months ago by
Ram
43k • written 9.0 years ago by
jyu429
▴ 120
5
votes
7
replies
3.0k
views
Merging bam files
bam
merge
updated 21 months ago by
Ram
43k • written 8.4 years ago by
jyu429
▴ 120
4
votes
3
replies
1.9k
views
Randomly filtering reads from two sam files
sam
samtools
updated 21 months ago by
Ram
43k • written 8.4 years ago by
jyu429
▴ 120
0
votes
1
reply
2.9k
views
IgBlast installation from src files
igblast
updated 17 months ago by
Ram
43k • written 8.9 years ago by
jyu429
▴ 120
0
votes
5
replies
2.3k
views
Modifying bam file sequence names according to 2nd column
bam
updated 15 months ago by
Ram
43k • written 9.0 years ago by
jyu429
▴ 120
4
votes
4
replies
2.7k
views
simulate reads with zero mutations
wgsim
updated 22 months ago by
Ram
43k • written 9.1 years ago by
jyu429
▴ 120
7
votes
13
replies
4.2k
views
Filtering fasta file based on identifier
fasta
filter
updated 2.3 years ago by
Ram
43k • written 9.5 years ago by
jyu429
▴ 120
3
votes
3
replies
4.5k
views
Piping samtools commands
samtools
updated 9.3 years ago by
GouthamAtla
12k • written 9.3 years ago by
jyu429
▴ 120
0
votes
2
replies
2.5k
views
bowtie2 --score-min how to input function
bowtie2
updated 9.5 years ago by
Devon Ryan
104k • written 9.5 years ago by
jyu429
▴ 120
4
votes
2
replies
2.4k
views
bioawk for identifiers that don't match pattern
bioawk
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
jyu429
▴ 120
5
votes
4
replies
9.7k
views
Understanding bowtie2 output
bowtie2
updated 2.2 years ago by
Ram
43k • written 9.5 years ago by
jyu429
▴ 120
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