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GSE experiment has two platforms, how to find GSM files specific to one platform without using GEOMetadb
R GEOQuery
updated 3.5 years ago by ★ 9.6k • written 10.2 years ago by ▴ 40
2
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3
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why does cuffdiff command line contain parameters suited for cufflinks?
RNA-Seq
updated 3.1 years ago by 45k • written 10.1 years ago by ▴ 40
0
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1
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1.4k
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Programs similar to a Genome browser, but specialized on plotting alignments over smaller sequences.
sequencing alignment
9.4 years ago by grokaine ▴ 40
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3.2k
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Comment: C: why does cuffdiff command line contain parameters suited for cufflinks?
10.1 years ago by grokaine ▴ 40
2
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4
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4.3k
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Why is my fastq data on two files if I am supposed to have single end reads?
RNA-Seq tophat2
updated 10.2 years ago by 10k • written 10.2 years ago by ▴ 40
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0
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3.4k
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Comment: C: gene co-expression on microarray assembled from GDS datasets is influenced by st
10.9 years ago by grokaine ▴ 40
2
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3
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3.4k
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gene co-expression on microarray assembled from GDS datasets is influenced by strong log2 negative outliers
GEO co-expression normalization Microarray
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 40
2
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0
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12k
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Comment: Comment: How to output a gene expression table using feature data corresponding to certai
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 40
10
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2
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12k
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How to output a gene expression table using feature data corresponding to certain labels from an ExpressionSet?
R GEOQuery
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 40
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