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1
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Answer: A: Visualization of chromosomal locations
updated 7.2 years ago by 45k • written 9.7 years ago by 13k
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3.2k
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Answer: A: TCGA tumor/normal RNA-seq somatic mutation calling
updated 7.2 years ago by 45k • written 9.7 years ago by 13k
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13k
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Comment: C: Detecting copy number alterations based on RNA-seq data
7.2 years ago by igor 13k
4
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8.2k
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Answer: A: Download all DNA mutations from TCGA
7.2 years ago by igor 13k
16
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12
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3.8k
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what happened to ea-utils?
ea-utils fastq
updated 7.2 years ago by 20 • written 9.3 years ago by 13k
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6.6k
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Comment: C: Making scRNA counts file from barcodes, genes and matrix.mtx file
7.2 years ago by igor 13k
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Comment: C: Stranded RNA-seq data visualization in UCSC
7.3 years ago by igor 13k
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4.2k
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Comment: C: Stranded RNA-seq data visualization in UCSC
7.3 years ago by igor 13k
1
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2.4k
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Comment: C: why do bed files not contain information about the reference?
7.3 years ago by igor 13k
1
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6.1k
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Comment: C: Can I convert normalized counts from DESEQ2 into fpkm?
7.3 years ago by igor 13k
1
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6.1k
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Comment: C: Can I convert normalized counts from DESEQ2 into fpkm?
7.3 years ago by igor 13k
1
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1
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6.1k
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Comment: C: Can I convert normalized counts from DESEQ2 into fpkm?
7.3 years ago by igor 13k
0
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2.1k
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Comment: C: Transformed cancer cell-lines RNA-seq database
7.3 years ago by igor 13k
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5.0k
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Comment: C: Seurat -FindVariableGenes problem
7.3 years ago by igor 13k
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5.0k
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Comment: C: Seurat -FindVariableGenes problem
7.3 years ago by igor 13k
2
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1.8k
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Comment: C: Is there any method to run tophat ?
7.3 years ago by igor 13k
0
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1
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2.1k
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Comment: C: Transformed cancer cell-lines RNA-seq database
7.3 years ago by igor 13k
3
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1
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2.5k
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Answer: A: Opinion on FastQC output for HiSeq 4000 PE sequencing run
7.3 years ago by igor 13k
1
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2.2k
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Comment: C: scimpute problem: error in read table
7.3 years ago by igor 13k
1
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1.8k
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Answer: A: How big are TAD boundaries?
7.3 years ago by igor 13k
5
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11k
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Answer: A: Inferring genotype based on RNA sequnces
7.3 years ago by igor 13k
0
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1
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4.9k
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Comment: C: SNP Analysis on Single Cell Data from 10x
7.3 years ago by igor 13k
2
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6.1k
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Answer: A: obtaining unique peaks in DiffBind
7.3 years ago by igor 13k
1
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1
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3.1k
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Comment: C: merging 10X genomics assemblies
7.3 years ago by igor 13k
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2.3k
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Answer: A: 10X based Single cell sequencing for comparing two different disease states
7.3 years ago by igor 13k
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1
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4.8k
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Comment: C: RSEM calculate expression troubleshoot
7.3 years ago by igor 13k
0
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4.6k
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Comment: C: SRA to fastq
7.4 years ago by igor 13k
1
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1.3k
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Comment: C: How to ensure your data is truly labeled?
7.4 years ago by igor 13k
1
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3.6k
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Comment: C: Create a File format to store Variant
7.4 years ago by igor 13k
3
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2.3k
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Answer: A: Asking about programs and methods to get gene methylation profiles
7.4 years ago by igor 13k
1
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4.0k
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Answer: A: Salmon choosing library type
7.4 years ago by igor 13k
0
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1
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11k
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Answer: A: Filtering rRNA from RNAseq data
7.4 years ago by igor 13k
5
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2
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5.6k
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Answer: A: Estimating cross contamination in a set of BAMS
7.4 years ago by igor 13k
0
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5.6k
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Comment: C: Estimating cross contamination in a set of BAMS
7.4 years ago by igor 13k
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1.6k
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Answer: A: how to make this plot for mutation in paired samples?
7.4 years ago by igor 13k
0
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0
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1.4k
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Comment: C: Single Cell mRNA Seq basic question
7.4 years ago by igor 13k
3
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1
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5.6k
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Answer: A: TCGAbiolinks TCGA-BRCA RNA-seq clinical data
updated 7.4 years ago by 12k • written 7.4 years ago by 13k
2
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1
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2.6k
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Comment: C: Analysis ready RNA Seq repository
7.4 years ago by igor 13k
1
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1
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3.0k
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Answer: A: How to know the mm9 genome size?
7.4 years ago by igor 13k
1
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1
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9.5k
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Answer: A: ATAC-seq macs2 peak calling bampe mode extension shift
7.4 years ago by igor 13k
0
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0
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5.0k
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Comment: C: Any tools for predicting binding affinity between TCR and epitode?
7.4 years ago by igor 13k
0
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1
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5.0k
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Answer: A: Immunotherapy tools for predicting binding affinity between TCR and epitode
7.4 years ago by igor 13k
2
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1
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1.4k
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Answer: A: How to predict the cellular origin of expression of a gene in a blood sample?
7.4 years ago by igor 13k
0
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0
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8.9k
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Comment: C: DAVID Fisher Exact Test contingency table
7.4 years ago by igor 13k
1
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0
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11k
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Comment: C: ssGSEA on RNA-Seq data from TCGA
7.4 years ago by igor 13k
3
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8
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8.9k
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DAVID Fisher Exact Test contingency table
pathway stats david
updated 7.4 years ago by ▴ 60 • written 8.5 years ago by 13k
0
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2.9k
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Comment: C: SOS -- MuTect is picking up obvious germline mutations
7.4 years ago by igor 13k
0
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0
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5.9k
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Comment: C: MSigDB for Multiple Organisms in a Tidy Data Format
7.4 years ago by igor 13k
0
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1
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2.2k
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Comment: C: addressing outdated software in paper reviews
7.4 years ago by igor 13k
3
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2
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8.2k
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Answer: A: bait interval list for picard collecthsmetrices
7.4 years ago by igor 13k
1,531 results • Page 14 of 31
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