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0
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0
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604
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Read distribution tool accounting for read orientation
RNA
4.2 years ago by VHahaut ★ 1.2k
3
votes
3
replies
2.6k
views
Potential Bacteria Contamination - RNA-Seq
RNA-Seq metagenomics
updated 4.9 years ago by ▴ 340 • written 5.1 years ago by ★ 1.2k
1
vote
0
replies
1.3k
views
scRNA compare gene set enrichment between clusters
scRNA
5.0 years ago by VHahaut ★ 1.2k
2
votes
4
replies
3.6k
views
Nucleotide per-position from bam file and filter on quality
SNP
updated 5.1 years ago by • 0 • written 9.2 years ago by ★ 1.2k
4
votes
1
reply
50k
views
Answer: A: Up-to-date Online RNA Sequence Analysis Training/Courses/Papers?
updated 5.7 years ago by 45k • written 9.6 years ago by ★ 1.2k
0
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0
replies
1.1k
views
Nanopore incomplete fragment sequencing
nanopore
updated 5.8 years ago by 20 • written 5.9 years ago by ★ 1.2k
0
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1
reply
6.2k
views
Comment: C: Fusion gene detection software
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.2k
2
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1
reply
6.2k
views
Comment: C: Fusion gene detection software
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.2k
0
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1
reply
52k
views
Comment: C: Gene Fusion Detection: Rna-Seq Data
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 1.2k
0
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0
replies
1.2k
views
Power Analysis 10x - Minimum number cells per cluster
10x scRNA
5.9 years ago by VHahaut ★ 1.2k
2
votes
1
reply
5.4k
views
Minimap2: supplementary alignment PAF
minimap2
updated 6.9 years ago by ▴ 30 • written 7.3 years ago by ★ 1.2k
1
vote
1
reply
1.6k
views
Differential expression: High variability inter-samples
DESeq2 edgeR limma
7.3 years ago by VHahaut ★ 1.2k
0
votes
1
reply
12k
views
Comment: C: using biomaRt in R to annotate SNPs to Genes within 1000kb
7.4 years ago by VHahaut ★ 1.2k
1
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0
replies
3.6k
views
Answer: A: How to name the genome in karyoploteR ?
7.9 years ago by VHahaut ★ 1.2k
0
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0
replies
2.1k
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Comment: C: Processing barcoded sequencing data
7.9 years ago by VHahaut ★ 1.2k
2
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1
reply
3.6k
views
Comment: C: ERCC count matrix smart-seq2
7.9 years ago by VHahaut ★ 1.2k
9
votes
5
replies
3.6k
views
ERCC count matrix smart-seq2
RNA-Seq
updated 7.9 years ago by ★ 2.9k • written 7.9 years ago by ★ 1.2k
1
vote
0
replies
8.5k
views
Answer: A: What's fascinating about Bioinformatics for potential students?
7.9 years ago by VHahaut ★ 1.2k
0
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1
reply
3.6k
views
Comment: C: DESeq2 with subset of genes
7.9 years ago by VHahaut ★ 1.2k
0
votes
0
replies
1.8k
views
Comment: C: Viral integration studies using RNA-seq data
7.9 years ago by VHahaut ★ 1.2k
0
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2
replies
1.8k
views
Comment: C: How to extend the heatmap data points that extended past end of ideogram in circ
7.9 years ago by VHahaut ★ 1.2k
1
vote
0
replies
4.9k
views
Comment: C: range of fold change in RNA seq
8.0 years ago by VHahaut ★ 1.2k
1
vote
0
replies
11k
views
Comment: C: Stack several manhattan plots
8.0 years ago by VHahaut ★ 1.2k
4
votes
1
reply
11k
views
Answer: A: Stack several manhattan plots
8.0 years ago by VHahaut ★ 1.2k
1
vote
1
reply
7.6k
views
Answer: C: data frame from deseq2
8.0 years ago by VHahaut ★ 1.2k
1
vote
1
reply
7.6k
views
Comment: C: data frame from deseq2
8.0 years ago by VHahaut ★ 1.2k
3
votes
1
reply
4.6k
views
Answer: A: miRNA corresponds to multiple ensembl gene IDs
8.0 years ago by VHahaut ★ 1.2k
0
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0
replies
3.4k
views
Answer: C: Is there an R function that transforms a decimal SAM FLAG into a list of strings
8.0 years ago by VHahaut ★ 1.2k
1
vote
1
reply
4.0k
views
Comment: C: DeconstructSigs - Multiple sample size(~90 samples)
8.0 years ago by VHahaut ★ 1.2k
1
vote
2
replies
4.0k
views
Answer: A: DeconstructSigs - Multiple sample size(~90 samples)
8.0 years ago by VHahaut ★ 1.2k
1
vote
1
reply
4.0k
views
Comment: C: DeconstructSigs - Multiple sample size(~90 samples)
8.0 years ago by VHahaut ★ 1.2k
1
vote
0
replies
2.3k
views
Answer: A: If it's possible for R detecting the reverse compliment sequence?
8.0 years ago by VHahaut ★ 1.2k
1
vote
0
replies
1.9k
views
Comment: C: RNA seq Newbie needing help
8.1 years ago by VHahaut ★ 1.2k
1
vote
0
replies
2.1k
views
karyoploteR: custom genome axis $latest.plot
karyoploteR R
updated 8.1 years ago by 20 • written 8.2 years ago by ★ 1.2k
0
votes
0
replies
2.0k
views
Comment: C: Virus sequence detected in my RNA-seq reads
8.1 years ago by VHahaut ★ 1.2k
1
vote
0
replies
3.1k
views
Comment: C: No differential gene expression after tuxedo protocol
8.1 years ago by VHahaut ★ 1.2k
0
votes
1
reply
3.1k
views
Comment: C: No differential gene expression after tuxedo protocol
8.1 years ago by VHahaut ★ 1.2k
1
vote
0
replies
1.7k
views
Answer: A: counting the reads mapped only to the coding sequence
8.2 years ago by VHahaut ★ 1.2k
0
votes
0
replies
2.3k
views
Comment: C: Enrichment of genomic feature in DNA breakpoints
8.2 years ago by VHahaut ★ 1.2k
0
votes
1
reply
2.0k
views
Full chromosome aneuploidy detection
genome aneuploidy
updated 8.3 years ago by ★ 2.1k • written 8.6 years ago by ★ 1.2k
2
votes
1
reply
1.8k
views
Comment: C: RNA-Seq in Bioconductor
8.3 years ago by VHahaut ★ 1.2k
1
vote
1
reply
2.9k
views
Comment: C: R loop not functional
8.3 years ago by VHahaut ★ 1.2k
3
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0
replies
1.7k
views
Answer: C: RNA seq data analyses
8.3 years ago by VHahaut ★ 1.2k
1
vote
0
replies
2.3k
views
Comment: C: how to measure independent variable to get unique values
8.3 years ago by VHahaut ★ 1.2k
1
vote
0
replies
3.0k
views
Comment: C: Use blastn to predict miRNA
8.3 years ago by VHahaut ★ 1.2k
1
vote
0
replies
3.0k
views
Comment: C: Use blastn to predict miRNA
8.3 years ago by VHahaut ★ 1.2k
0
votes
0
replies
3.0k
views
Comment: C: Use blastn to predict miRNA
8.3 years ago by VHahaut ★ 1.2k
1
vote
2
replies
1.8k
views
Comment: C: Suggestion for algorithms for DNA Mapping
8.3 years ago by VHahaut ★ 1.2k
2
votes
0
replies
3.0k
views
Answer: A: Create gene expression matrix from miRNA
8.3 years ago by VHahaut ★ 1.2k
2
votes
0
replies
2.1k
views
Comment: C: Which package is appropriate to the normalised RNA-seq data for differential exp
8.3 years ago by VHahaut ★ 1.2k
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