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8
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0
replies
3.5k
views
Answer: A: Replacing Dots In File
5.4 years ago by toni ★ 2.2k
1
vote
0
replies
115k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.4 years ago by 45k • written 13.5 years ago by ★ 2.2k
9
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0
replies
115k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 5.4 years ago by 45k • written 14.4 years ago by ★ 2.2k
6
votes
1
reply
101k
views
Answer: A: How To Split One Big Sequence File Into Multiple Files With Less Than 1000 Seque
updated 5.7 years ago by 45k • written 14.1 years ago by ★ 2.2k
6
votes
2
replies
24k
views
Answer: A: R: Heatmaps Log2 Scale Or Non Log Scale?
updated 6.2 years ago by 45k • written 14.8 years ago by ★ 2.2k
13
votes
6
replies
6.1k
views
Selecting Nodes Of High Correlation In A Tree
microarray gene clustering
updated 7.2 years ago by 45k • written 15.5 years ago by ★ 2.2k
2
votes
2
replies
11k
views
Answer: Answer: Calculate percentage of bases covered less than nX in targeted sequencing experi
updated 3.6 years ago by 45k • written 7.3 years ago by ★ 2.2k
0
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0
replies
21k
views
Comment: C: Final Solution For "Mapq Should Be 0 For Unmapped Read."
9.5 years ago by toni ★ 2.2k
0
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1
reply
7.3k
views
Comment: Comment: how to calculate the correlation and p values for all combination of a gene expr
updated 3.5 years ago by 45k • written 10.7 years ago by ★ 2.2k
9
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1
reply
3.0k
views
Answer: Answer: Does build 37 of the human reference genome contain 2.85Gbp?
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 2.2k
2
votes
1
reply
110k
views
Comment: Comment: Multiline Fasta To Single Line Fasta
updated 3.7 years ago by 45k • written 10.9 years ago by ★ 2.2k
1
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0
replies
4.2k
views
Answer: Answer: Does read-depth refer to a fold?
updated 3.8 years ago by 45k • written 11.1 years ago by ★ 2.2k
66
votes
43
replies
32k
views
23 follow
Ngs - Huge (Fastq) File Parsing - Which Language For Good Efficiency ?
next-gen sequencing parsing fastq programming
updated 3.8 years ago by 45k • written 14.8 years ago by ★ 2.2k
9
votes
1
reply
16k
views
Library Duplicates Vs. Optical Duplicates (Picard Markduplicates)
picard markduplicates bam
updated 11.8 years ago by 20 • written 14.1 years ago by ★ 2.2k
0
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0
replies
5.8k
views
Comment: C: Markduplicates Creating A Loss Of Mate Pair
12.1 years ago by toni ★ 2.2k
1
vote
2
replies
4.7k
views
Answer: A: Split Fastq Paired-Read Using Awk
12.5 years ago by toni ★ 2.2k
2
votes
0
replies
10k
views
Comment: C: How To Extract Consensus Sequence Of Mapped Regions From A Bam File?
12.6 years ago by toni ★ 2.2k
0
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0
replies
16k
views
Comment: C: Fastq Quality Control And Reporting - Aka Fastqc Versus The New Contenders
12.7 years ago by toni ★ 2.2k
0
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1
reply
7.3k
views
Comment: C: Total Duplicate Percentage Reported In Fastqc
12.7 years ago by toni ★ 2.2k
0
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1
reply
7.3k
views
Comment: C: Total Duplicate Percentage Reported In Fastqc
12.7 years ago by toni ★ 2.2k
2
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0
replies
4.3k
views
Comment: C: What If Your Polya+, 50Bp, Illumina_Hi-Seq_Paired-End_Rna-Seq Data Has ~86% Dupl
12.7 years ago by toni ★ 2.2k
19
votes
6
replies
5.0k
views
Best Practices For Pipeline Versioning
pipeline
updated 12.7 years ago by 5.0k • written 12.7 years ago by ★ 2.2k
4
votes
2
replies
15k
views
Answer: A: How Can I Split Paired End Fastq Files
12.7 years ago by toni ★ 2.2k
1
vote
1
reply
15k
views
Comment: C: How Can I Split Paired End Fastq Files
12.7 years ago by toni ★ 2.2k
1
vote
1
reply
15k
views
Comment: C: How Can I Split Paired End Fastq Files
12.7 years ago by toni ★ 2.2k
1
vote
0
replies
15k
views
Comment: C: How Can I Split Paired End Fastq Files
12.7 years ago by toni ★ 2.2k
0
votes
0
replies
5.0k
views
Comment: C: Best Practices For Pipeline Versioning
12.7 years ago by toni ★ 2.2k
0
votes
1
reply
5.0k
views
Comment: C: I Have A Problem Using The Gem Mapper To Calculate Mappability. It Dies After A
12.7 years ago by toni ★ 2.2k
0
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1
reply
5.0k
views
Comment: C: I Have A Problem Using The Gem Mapper To Calculate Mappability. It Dies After A
12.7 years ago by toni ★ 2.2k
6
votes
1
reply
55k
views
Answer: Answer: Tool To Find Out If Fastq Is In Sanger Or Phred64 Encoding?
updated 2.8 years ago by 45k • written 12.7 years ago by ★ 2.2k
3
votes
1
reply
12k
views
Answer: A: Disable Soft-Clipping Bwa Aln
12.8 years ago by toni ★ 2.2k
3
votes
0
replies
9.8k
views
Answer: A: How To Parse Fastq File?
12.8 years ago by toni ★ 2.2k
1
vote
1
reply
9.8k
views
Comment: C: How To Parse Fastq File?
12.8 years ago by toni ★ 2.2k
0
votes
1
reply
21k
views
Comment: C: Best Copy Number Variation Tools
13.0 years ago by toni ★ 2.2k
0
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0
replies
6.0k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
13.0 years ago by toni ★ 2.2k
1
vote
0
replies
21k
views
Answer: A: Final Solution For "Mapq Should Be 0 For Unmapped Read."
13.0 years ago by toni ★ 2.2k
0
votes
0
replies
6.0k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
13.0 years ago by toni ★ 2.2k
0
votes
0
replies
6.0k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
13.0 years ago by toni ★ 2.2k
0
votes
0
replies
6.0k
views
Comment: C: Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
13.0 years ago by toni ★ 2.2k
4
votes
8
replies
6.0k
views
Bwa Soft-Clipping Pattern In Read Length Distribution Using "-Q 20" Parameter
bwa alignment quality
updated 13.0 years ago by 3.0k • written 13.0 years ago by ★ 2.2k
1
vote
0
replies
70k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
updated 13.2 years ago by 103k • written 14.3 years ago by ★ 2.2k
0
votes
0
replies
5.0k
views
Comment: C: Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
13.6 years ago by toni ★ 2.2k
0
votes
0
replies
5.0k
views
Comment: C: Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
13.6 years ago by toni ★ 2.2k
1
vote
0
replies
3.1k
views
Answer: A: How To Merge Fasta Header With Description Using Perl :
13.6 years ago by toni ★ 2.2k
9
votes
7
replies
5.0k
views
Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
genome next-gen sequencing mapping analysis
updated 13.6 years ago by ★ 1.5k • written 13.6 years ago by ★ 2.2k
1
vote
2
replies
4.2k
views
Answer: A: How Reads Have Been Mapped In My Bam File?
13.6 years ago by toni ★ 2.2k
0
votes
0
replies
5.0k
views
Comment: C: Fine Tune Ngs Downstream Analyses Using Genome Mappability ?
13.6 years ago by toni ★ 2.2k
0
votes
0
replies
24k
views
Comment: C: Bwa Aln Output In .Bam
13.6 years ago by toni ★ 2.2k
0
votes
0
replies
24k
views
Comment: C: Bwa Aln Output In .Bam
13.6 years ago by toni ★ 2.2k
0
votes
0
replies
24k
views
Comment: C: Bwa Aln Output In .Bam
13.6 years ago by toni ★ 2.2k
120 results • Page 1 of 3
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