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2
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1
reply
5.4k
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Comment: C: best workflow for RNA data analysis without replications
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 380
1
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0
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3.2k
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Answer: A: Find particular SNPs affecting PCA
updated 5.9 years ago by 45k • written 9.8 years ago by ▴ 380
0
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0
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2.2k
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Comment: C: Variable selection for multiple regression from large number of predictors
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
0
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1
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4.7k
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Comment: C: Disadvantage of RNA-seq compared with Microarray?
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
1
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0
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5.8k
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Comment: C: Heatmap of Differentially Expressed Genes
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
0
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1
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4.3k
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Comment: C: MEGAN: Exported number of assigned reads is actually the summarized hits
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
0
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0
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2.2k
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Answer: A: Plotting RPKMS per chromosome
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
0
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0
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6.1k
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Answer: A: Creating a Venn Diagram from Microarray Data
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
1
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1
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3.7k
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Comment: C: Merging bam files
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
0
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0
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2.5k
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Comment: C: Finding the largest possible combination of mutations
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
2
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1
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5.7k
views
Answer: A: count reads in ambiguous regions for both features
updated 5.9 years ago by 45k • written 9.9 years ago by ▴ 380
1
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1
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2.9k
views
Answer: A: Is there any databases preloaded with GO annotations for each species?
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
2
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0
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7.1k
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Comment: C: best alignment tool for Ion Torrent data
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
3
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0
replies
7.6k
views
Comment: C: RNA-Seq Analysis: To sort or not to Sort?
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
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1
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7.6k
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Comment: C: RNA-Seq Analysis: To sort or not to Sort?
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
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1
reply
5.0k
views
Answer: Answer: how to convert R contingency table to a matrix that will be used to merge with o
updated 3.2 years ago by 45k • written 10.0 years ago by ▴ 380
0
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0
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5.0k
views
Comment: C: how to convert R contingency table to a matrix that will be used to merge with o
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
1
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0
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2.0k
views
Answer: A: ensemble illumina tissues aligned rnaSeq
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
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0
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2.3k
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Comment: C: Customised calling of heterozygous snp
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
1
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0
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3.8k
views
Comment: Comment: How to correct invalid genotype in ped file ?
updated 3.2 years ago by 45k • written 10.0 years ago by ▴ 380
4
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1
reply
1.8k
views
Answer: A: Check whether a fasta header has sequence underneath it
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
1
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0
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8.8k
views
Comment: C: extracting heterozygous snp from a vcf file
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
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0
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11k
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Comment: C: How to filter short length blast results from output
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
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1
reply
5.3k
views
Comment: C: Get multiple snps coverage (allelic depth) from bam files
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
1
vote
1
reply
11k
views
Answer: A: How to filter short length blast results from output
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
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1
reply
5.3k
views
Comment: C: Get multiple snps coverage (allelic depth) from bam files
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
1
vote
1
reply
11k
views
Comment: C: How to filter short length blast results from output
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
1
vote
1
reply
5.3k
views
Answer: A: Get multiple snps coverage (allelic depth) from bam files
updated 5.9 years ago by 45k • written 10.0 years ago by ▴ 380
0
votes
0
replies
6.3k
views
Comment: C: GSEA using clusterProfiler
6.6 years ago by mkulecka ▴ 380
0
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0
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3.0k
views
Comment: C: Error in SAMseq analysis with R
7.0 years ago by mkulecka ▴ 380
2
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0
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3.6k
views
Answer: A: Notable open source bioinformatics projects written in Java?
updated 7.1 years ago by 45k • written 9.7 years ago by ▴ 380
0
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0
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4.3k
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Answer: A: Identifying CNVs from targeted amplicon sequencing
7.4 years ago by mkulecka ▴ 380
0
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0
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2.4k
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Answer: A: Can I determine the machine used for RNA-seq from the .count file extension?
7.4 years ago by mkulecka ▴ 380
0
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0
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2.5k
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Answer: A: Way too much data generated for 1 WGS sample
7.6 years ago by mkulecka ▴ 380
1
vote
0
replies
46k
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Comment: C: Pca From Vcf Files
7.7 years ago by mkulecka ▴ 380
0
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1
reply
3.8k
views
Comment: C: Merge multiple vcf files while preserving FILTER information
7.9 years ago by mkulecka ▴ 380
3
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3
replies
3.8k
views
Merge multiple vcf files while preserving FILTER information
variants vcf
updated 15 months ago by 45k • written 7.9 years ago by ▴ 380
0
votes
1
reply
2.7k
views
Long non-coding RNA database in mouse
RNA-Seq lncRNA
updated 8.7 years ago by 20 • written 8.7 years ago by ▴ 380
0
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1
reply
3.1k
views
Comment: C: usearch version, which one use to get results faster?
8.9 years ago by mkulecka ▴ 380
0
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0
replies
1.8k
views
Comment: C: list variants that map to a genomic location
9.2 years ago by mkulecka ▴ 380
1
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1
reply
2.7k
views
Answer: A: Cancer RNA-seq data
9.2 years ago by mkulecka ▴ 380
0
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0
replies
3.7k
views
Comment: C: Very slow Bio-linux on VirtualBox?
9.3 years ago by mkulecka ▴ 380
1
vote
1
reply
3.7k
views
Answer: A: Very slow Bio-linux on VirtualBox?
9.3 years ago by mkulecka ▴ 380
2
votes
2
replies
3.1k
views
Ion Torrent Proton RNASeq reads alignment
RNA-Seq ion torrent
updated 9.3 years ago by 48k • written 9.3 years ago by ▴ 380
5
votes
1
reply
46k
views
Answer: A: Pca From Vcf Files
9.4 years ago by mkulecka ▴ 380
0
votes
0
replies
6.5k
views
Answer: A: Any R and bioconductor packages for non parametric test for rna seq count data.
9.5 years ago by mkulecka ▴ 380
0
votes
0
replies
2.9k
views
Answer: Answer: How to judge severity of variants in genes
updated 3.3 years ago by 45k • written 9.7 years ago by ▴ 380
0
votes
1
reply
4.4k
views
Comment: C: SnpSift annotate outputs invalid files?
9.9 years ago by mkulecka ▴ 380
3
votes
4
replies
2.5k
views
Finding the largest possible combination of mutations
next-gen programming algorithms
updated 3.2 years ago by 45k • written 9.9 years ago by ▴ 380
1
vote
0
replies
2.2k
views
Comment: C: what happens with htseq-count when several lines in a gff has the same ID?
10.0 years ago by mkulecka ▴ 380
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