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967
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Comment: Comment: Sorting the Input Bam file by Read Id.
updated 23 months ago by 13k • written 23 months ago by ▴ 30
0
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2
replies
967
views
Sorting the Input Bam file by Read Id.
Samblaster read InputBAM id
updated 23 months ago by 13k • written 23 months ago by ▴ 30
0
votes
1
reply
856
views
Detecting NUMTS (nuclear mitochondrial sequences) in the whole genome sequenced data
genome-mining mitochondrial-genome pseudogenes NuMTs
updated 2.1 years ago by 45k • written 3.6 years ago by ▴ 30
0
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1
reply
5.8k
views
Answer: A: Best Way To Assemble A Plasmid
updated 5.3 years ago by 45k • written 9.4 years ago by ▴ 30
0
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1
reply
10k
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Comment: A: De Novo Assembly Of A Bacterial Plasmid
updated 5.3 years ago by 45k • written 9.4 years ago by ▴ 30
0
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1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
updated 5.4 years ago by 45k • written 9.5 years ago by ▴ 30
0
votes
1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
updated 5.4 years ago by 45k • written 9.5 years ago by ▴ 30
0
votes
1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
updated 5.4 years ago by 45k • written 9.5 years ago by ▴ 30
0
votes
1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
updated 5.4 years ago by 45k • written 9.5 years ago by ▴ 30
0
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0
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6.7k
views
Comment: A: How to include unpaired reads in assembly?
updated 5.4 years ago by 45k • written 9.0 years ago by ▴ 30
3
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6
replies
5.2k
views
System Error in SPADES during fungal denovo-genome assembly?
Assembly software error
updated 7.3 years ago by ▴ 10 • written 9.0 years ago by ▴ 30
0
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0
replies
1.8k
views
Linkage disequlibrium decay for a haploid fungi
SNP haploid LD
8.4 years ago by jigarnt ▴ 30
0
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1
reply
3.8k
views
Comment: C: Error in running a Samtools mpileup script for getting base frequency informatio
8.6 years ago by jigarnt ▴ 30
0
votes
1
reply
3.8k
views
Comment: C: Error in running a Samtools mpileup script for getting base frequency informatio
8.6 years ago by jigarnt ▴ 30
0
votes
1
reply
3.8k
views
Comment: C: Error in running a Samtools mpileup script for getting base frequency informatio
8.6 years ago by jigarnt ▴ 30
3
votes
7
replies
3.8k
views
Error in running a Samtools mpileup script for getting base frequency information
genome mpileup
updated 8.6 years ago by 105k • written 8.6 years ago by ▴ 30
0
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1
reply
2.0k
views
How to use "Mpileup" for getting information of the reads of the SNP from the BAM files?
SNP genome BAM Mpileup
updated 8.6 years ago by ▴ 870 • written 8.6 years ago by ▴ 30
0
votes
5
replies
2.9k
views
Error in a custom Perl script for detecting recombination
perl recombination syntax error
updated 8.8 years ago by 45k • written 8.8 years ago by ▴ 30
0
votes
1
reply
2.9k
views
Comment: C: Error in a custom Perl script for detecting recombination
8.8 years ago by jigarnt ▴ 30
0
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0
replies
30k
views
Comment: C: Tajima's D value interpretation
8.9 years ago by jigarnt ▴ 30
0
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0
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2.0k
views
Comment: C: Can a dsRNA get sequenced on illumina with the 125bp pair end library meant for
9.0 years ago by jigarnt ▴ 30
2
votes
4
replies
2.0k
views
Can a dsRNA get sequenced on illumina with the 125bp pair end library meant for DNA sequencing?
genome
updated 9.0 years ago by ★ 1.8k • written 9.0 years ago by ▴ 30
0
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0
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3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
0
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1
reply
5.2k
views
Comment: C: System Error in SPADES during fungal denovo-genome assembly?
9.0 years ago by jigarnt ▴ 30
0
votes
0
replies
3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
9.0 years ago by jigarnt ▴ 30
4
votes
14
replies
3.2k
views
What should be an ideal coverage of an assembled putative eukaryotic Plasmid?
Assembly sequence plasmid spades
updated 9.0 years ago by ★ 2.2k • written 9.0 years ago by ▴ 30
0
votes
1
reply
2.3k
views
Comment: C: Denovo assembly of Putative Plasmid
9.0 years ago by jigarnt ▴ 30
1
vote
0
replies
4.3k
views
Answer: A: Detecting Polymorphic sites from VCF file
9.0 years ago by jigarnt ▴ 30
0
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0
replies
2.3k
views
Comment: C: Denovo assembly of Putative Plasmid
9.0 years ago by jigarnt ▴ 30
2
votes
5
replies
2.3k
views
Denovo assembly of Putative Plasmid
SNP next-gen software error
9.0 years ago by jigarnt ▴ 30
0
votes
0
replies
1.9k
views
Answer: A: the output of denovo assembly metagenomics
9.0 years ago by jigarnt ▴ 30
0
votes
0
replies
9.1k
views
Answer: A: Assembly Illumina Paired End Reads
9.0 years ago by jigarnt ▴ 30
0
votes
1
reply
10k
views
Comment: A: De Novo Assembly Of A Bacterial Plasmid
9.0 years ago by jigarnt ▴ 30
0
votes
0
replies
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
9.5 years ago by jigarnt ▴ 30
0
votes
0
replies
172k
views
Comment: C: What Is The Sequencing 'Depth' ?
9.5 years ago by jigarnt ▴ 30
0
votes
1
reply
5.7k
views
Comment: Comment: Finding True SNPs after hard filtering on GATK
updated 2.5 years ago by 45k • written 9.5 years ago by ▴ 30
0
votes
1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
9.5 years ago by jigarnt ▴ 30
0
votes
1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
9.5 years ago by jigarnt ▴ 30
0
votes
1
reply
5.7k
views
Comment: C: Finding True SNPs after hard filtering on GATK
9.5 years ago by jigarnt ▴ 30
0
votes
17
replies
5.7k
views
Finding True SNPs after hard filtering on GATK
SNP
updated 2.5 years ago by 45k • written 9.5 years ago by ▴ 30
0
votes
0
replies
5.7k
views
Comment: Comment: Finding True SNPs after hard filtering on GATK
updated 2.5 years ago by 45k • written 9.5 years ago by ▴ 30
0
votes
0
replies
5.3k
views
Comment: C: How To Select A Private Snp With Gatk From A Multisample Vcf File
9.5 years ago by jigarnt ▴ 30
0
votes
1
reply
5.3k
views
Answer: A: How To Select A Private Snp With Gatk From A Multisample Vcf File
9.5 years ago by jigarnt ▴ 30
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