Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.2k
views
Answer: Answer: no output from GATK CombineGVCFs
10 months ago by Vitis ★ 2.5k
1
vote
0
replies
2.4k
views
Answer: Answer: Seurat sctransform - does anyone know of a good explanation for biologists?
2.5 years ago by Vitis ★ 2.5k
0
votes
0
replies
5.3k
views
Answer: Answer: Biopython Seqio.Index() And Seqio.Index_Db() Very Slow For Large Sequence
2.5 years ago by Vitis ★ 2.5k
0
votes
0
replies
4.2k
views
Answer: Answer: Y Chromosome Heterozygotes?
2.9 years ago by Vitis ★ 2.5k
0
votes
1
reply
4.9k
views
Comment: C: Gene expression heatmap following pseudotime analysis
3.2 years ago by Vitis ★ 2.5k
3
votes
7
replies
4.9k
views
Gene expression heatmap following pseudotime analysis
RNA-Seq
updated 3.2 years ago by 13k • written 3.2 years ago by ★ 2.5k
1
vote
0
replies
4.9k
views
Comment: C: Gene expression heatmap following pseudotime analysis
3.2 years ago by Vitis ★ 2.5k
0
votes
0
replies
4.9k
views
Comment: C: Gene expression heatmap following pseudotime analysis
3.2 years ago by Vitis ★ 2.5k
1
vote
1
reply
3.5k
views
Comment: C: GATK GenomicsDBImport intervals
3.9 years ago by Vitis ★ 2.5k
3
votes
3
replies
817
views
Analysis of host-parasite mixed transcriptome
RNA-Seq alignment
updated 3.9 years ago by 141k • written 3.9 years ago by ★ 2.5k
0
votes
0
replies
817
views
Comment: C: Analysis of host-parasite mixed transcriptome
3.9 years ago by Vitis ★ 2.5k
1
vote
0
replies
838
views
Variant calling from short/long read hybrid BAM
SNP sequencing
4.1 years ago by Vitis ★ 2.5k
1
vote
0
replies
21k
views
Answer: A: how to visualize the bedgraph and bed file
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 2.5k
3
votes
0
replies
3.6k
views
Answer: A: Counting the number of paralogs in various species
updated 4.3 years ago by 43k • written 9.9 years ago by ★ 2.5k
0
votes
0
replies
1.9k
views
Answer: A: Circos Plot for synteny file
4.3 years ago by Vitis ★ 2.5k
1
vote
0
replies
839
views
Answer: A: How are haplotypes/heterozygosity resolved in sequence assembly?
4.3 years ago by Vitis ★ 2.5k
0
votes
0
replies
3.3k
views
Answer: A: Using ensembl biomart retrieving orthologous codin sequence
updated 4.3 years ago by 43k • written 10.0 years ago by ★ 2.5k
0
votes
0
replies
2.7k
views
Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 4.4 years ago by 43k • written 10.0 years ago by ★ 2.5k
0
votes
1
reply
2.7k
views
Comment: C: Automatically Generating Robust Phylogenetic Trees
updated 4.4 years ago by 43k • written 10.0 years ago by ★ 2.5k
1
vote
1
reply
2.7k
views
Answer: A: Automatically Generating Robust Phylogenetic Trees
updated 4.4 years ago by 43k • written 10.0 years ago by ★ 2.5k
1
vote
1
reply
846
views
Answer: A: A good tutorial for eukaryotic phylogeny?
4.4 years ago by Vitis ★ 2.5k
0
votes
0
replies
2.6k
views
Comment: C: Detecting Derived Sites
updated 4.4 years ago by 43k • written 12.7 years ago by ★ 2.5k
4
votes
0
replies
2.4k
views
Answer: A: BWA Mem -M flag (mark split hits) effect on structural variation calling
4.5 years ago by Vitis ★ 2.5k
0
votes
0
replies
874
views
Answer: A: Variant Annotation and prioritization
4.5 years ago by Vitis ★ 2.5k
0
votes
0
replies
1.2k
views
Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
4.5 years ago by Vitis ★ 2.5k
0
votes
1
reply
2.2k
views
Comment: C: snpEff build not working with gff3
4.5 years ago by Vitis ★ 2.5k
1
vote
0
replies
2.1k
views
Answer: A: Visualizations of chimeric connections in different chromosomes
4.5 years ago by Vitis ★ 2.5k
1
vote
1
reply
1.2k
views
Comment: C: Mutant Transcript is higher than the WT. What may be the reason?
4.5 years ago by Vitis ★ 2.5k
1
vote
0
replies
2.2k
views
Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
4.5 years ago by Vitis ★ 2.5k
0
votes
0
replies
9.6k
views
Answer: A: Insert Size For Each Bam Entry
updated 4.6 years ago by 43k • written 10.1 years ago by ★ 2.5k
1
vote
0
replies
927
views
Answer: A: Different alleles or paralogs?
4.6 years ago by Vitis ★ 2.5k
0
votes
0
replies
1.9k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
4.6 years ago by Vitis ★ 2.5k
0
votes
1
reply
1.9k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
4.6 years ago by Vitis ★ 2.5k
0
votes
1
reply
1.9k
views
Comment: C: GATK JointDiscovery Error - Java Heap Space?
4.6 years ago by Vitis ★ 2.5k
7
votes
0
replies
7.1k
views
Answer: A: Ka/Ks Ratio For Within A Gene - Very Confused !!
updated 4.6 years ago by 43k • written 12.6 years ago by ★ 2.5k
0
votes
1
reply
1.6k
views
Comment: C: Question about generate a mappability mask file for non-human species
4.6 years ago by Vitis ★ 2.5k
1
vote
0
replies
7.1k
views
Answer: A: Local Graphic View Of Blast Results
updated 4.6 years ago by 43k • written 12.7 years ago by ★ 2.5k
2
votes
0
replies
2.5k
views
Answer: A: How to replicate vcftool's sliding window SNP density?
4.6 years ago by Vitis ★ 2.5k
0
votes
0
replies
980
views
Answer: A: Efficiently run blat for long sequences
4.6 years ago by Vitis ★ 2.5k
0
votes
1
reply
1.6k
views
Comment: C: Question about generate a mappability mask file for non-human species
4.6 years ago by Vitis ★ 2.5k
1
vote
0
replies
17k
views
Answer: A: Can I Access Bam File Information Without Converting To Sam?
updated 4.6 years ago by 43k • written 12.7 years ago by ★ 2.5k
2
votes
0
replies
3.6k
views
Answer: A: Shotgun metagenomics high duplication read rate - how high is too high?
4.6 years ago by Vitis ★ 2.5k
1
vote
0
replies
7.0k
views
Answer: A: Dump Upstream Sequence
updated 4.7 years ago by 43k • written 12.6 years ago by ★ 2.5k
10
votes
7
replies
4.2k
views
Housekeeping Gene Identifications
gene microarray meta
updated 4.7 years ago by ▴ 40 • written 12.6 years ago by ★ 2.5k
0
votes
0
replies
1.1k
views
Comment: C: Read Count Differences in Amplicon Sequencing
4.8 years ago by Vitis ★ 2.5k
0
votes
0
replies
2.6k
views
Answer: A: ref and alt allele count from BAM file
4.8 years ago by Vitis ★ 2.5k
0
votes
1
reply
4.8k
views
Comment: C: Read-based phasing with WhatsHap
4.9 years ago by Vitis ★ 2.5k
2
votes
0
replies
6.5k
views
Comment: C: How to do data cleaning for VCF genetic file
4.9 years ago by Vitis ★ 2.5k
4
votes
1
reply
2.1k
views
Answer: A: trouble with bedtools intersect and coverage
4.9 years ago by Vitis ★ 2.5k
1
vote
0
replies
1.7k
views
Comment: C: JBrowse help with opening a Gff gene model file
4.9 years ago by Vitis ★ 2.5k
336 results • Page 1 of 7
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6