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Comment: C: Differential expression analysis of non-coding RNA-Seq data
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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3.2k
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Comment: C: Differential expression analysis of non-coding RNA-Seq data
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
3.2k
views
Comment: C: Differential expression analysis of non-coding RNA-Seq data
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
3.2k
views
Comment: C: Differential expression analysis of non-coding RNA-Seq data
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.2k
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Comment: C: geom_line with hclust data of expression matrix
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.2k
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Comment: C: geom_line with hclust data of expression matrix
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.2k
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Comment: C: geom_line with hclust data of expression matrix
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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6
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2.2k
views
geom_line with hclust data of expression matrix
ggplot hclust clustering
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.3k
views
genome-wide gene occupancy profiles
ChIP-Seq occupany profile bedgraph
8.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.4k
views
ChIP-chip ANalysis of NimbleGen tiling arrays
chip-chip peak-calling differential-binding arrays
8.1 years ago by Assa Yeroslaviz ★ 1.9k
1
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1
reply
2.8k
views
how to calculate with metadata of GRanges Objects
genomicranges rtracklayer bigwig granges macs2
8.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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1.8k
views
Comment: C: How does differences in library size infuences ChIP-Seq experiments?
8.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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2
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1.8k
views
How does differences in library size infuences ChIP-Seq experiments?
ChIP-Seq library normalisation
updated 8.2 years ago by 103k • written 8.2 years ago by ★ 1.9k
9
votes
5
replies
3.5k
views
Searching For Deletion In A Low Number Of Reads
tophat indel mitochondria
updated 8.4 years ago by 20 • written 13.0 years ago by ★ 1.9k
3
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14
replies
3.1k
views
6 follow
Read a text file into a list
r list
updated 8.4 years ago by 12k • written 8.4 years ago by ★ 1.9k
0
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0
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3.1k
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Comment: C: Read a text file into a list
8.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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3.1k
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Comment: C: Read a text file into a list
8.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
3.1k
views
Comment: C: Read a text file into a list
8.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
3.1k
views
Comment: C: Read a text file into a list
8.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
3.1k
views
Comment: C: Read a text file into a list
8.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
9.0k
views
Comment: C: Is the DAVID knowledgebase not updated any more?
8.5 years ago by Assa Yeroslaviz ★ 1.9k
8
votes
6
replies
8.9k
views
understanding multi-mapped reads
tophat2 multi-mapped unique samtools
updated 8.6 years ago by 9.0k • written 8.6 years ago by ★ 1.9k
0
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0
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2.7k
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Comment: C: BLAT against nt
8.6 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.7k
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Comment: C: BLAT against nt
8.6 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.7k
views
Comment: C: BLAT against nt
8.6 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
6
replies
2.7k
views
BLAT against nt
BLAT nt contamination 2bit fasta
8.7 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
1.9k
views
compare rows of colData and count Matrix
dexseq deseq matrix
8.7 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
1.8k
views
retrieve organism from protein list
proteom RNA-Seq blast
updated 8.7 years ago by 8.7k • written 8.7 years ago by ★ 1.9k
0
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0
replies
2.2k
views
why does ReportingTools does not work with yeast annotations
reportingTools yeast R annotations
8.8 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
2
replies
23k
views
export list objects to XLS files
WriteXLS xlsx lists
updated 8.9 years ago by ▴ 200 • written 8.9 years ago by ★ 1.9k
0
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0
replies
2.9k
views
edgeR User Guide batch effect question
edgeR batch correlation
9.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
3.7k
views
Comment: C: finding significance between transcripts in a RNA-Seq experiment
9.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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3.7k
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Comment: C: finding significance between transcripts in a RNA-Seq experiment
9.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
3.7k
views
Comment: C: finding significance between transcripts in a RNA-Seq experiment
9.1 years ago by Assa Yeroslaviz ★ 1.9k
2
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10
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3.7k
views
finding significance between transcripts in a RNA-Seq experiment
tximport deseq2 edger limma kallisto
9.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.5k
views
Answer: A: Significance within conditions
9.2 years ago by Assa Yeroslaviz ★ 1.9k
2
votes
5
replies
2.5k
views
Significance within conditions
RNA-Seq dexseq deseq2 cuffdiff kallisto
9.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
3.1k
views
Comment: C: maSigPro warnings in glm.fit
9.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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2.5k
views
Comment: C: Significance within conditions
9.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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7.7k
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Comment: C: reduced quality in a paired-end R2 reads
9.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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7.7k
views
Comment: C: reduced quality in a paired-end R2 reads
9.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
7.7k
views
Comment: C: reduced quality in a paired-end R2 reads
9.3 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
2
replies
7.7k
views
Comment: C: reduced quality in a paired-end R2 reads
9.3 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
7.7k
views
Comment: C: reduced quality in a paired-end R2 reads
9.3 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
7.7k
views
Comment: C: reduced quality in a paired-end R2 reads
9.3 years ago by Assa Yeroslaviz ★ 1.9k
4
votes
20
replies
7.7k
views
reduced quality in a paired-end R2 reads
QC quality fastqc rna-seq ChIP-Seq
updated 9.3 years ago by 20k • written 9.3 years ago by ★ 1.9k
0
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0
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2.7k
views
Comment: C: Cuffmerge:Which samples to use for creating a merged gtf file?
9.3 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
0
replies
2.0k
views
identification of cryptic introns splice events
cryptic introns splice events alternative splicing
9.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.3k
views
Comment: C: Mapping list of significant genes with viPEr
9.5 years ago by Assa Yeroslaviz ★ 1.9k
11
votes
5
replies
9.2k
views
following Kallisto with DESeq2 using tximport package
tximport kallisto deseq2 ucsc ensembl
updated 3.1 years ago by 45k • written 9.6 years ago by ★ 1.9k
618 results • Page 8 of 13
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