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Comment: C: Cuffmerge:Which samples to use for creating a merged gtf file?
9.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.0k
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identification of cryptic introns splice events
cryptic introns splice events alternative splicing
9.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.4k
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Comment: C: Mapping list of significant genes with viPEr
9.6 years ago by Assa Yeroslaviz ★ 1.9k
11
votes
5
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9.4k
views
following Kallisto with DESeq2 using tximport package
tximport kallisto deseq2 ucsc ensembl
updated 3.3 years ago by 45k • written 9.8 years ago by ★ 1.9k
4
votes
5
replies
6.5k
views
HOWTO extract regions from GRanges object
GenomicRanges R GRanges IRanges
updated 3.3 years ago by 45k • written 9.8 years ago by ★ 1.9k
0
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0
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6.5k
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Comment: C: HOWTO extract regions from GRanges object
9.8 years ago by Assa Yeroslaviz ★ 1.9k
4
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1
reply
3.6k
views
inconsistency of Mfuzz clustering
expression-profile Mfuzz clustering
updated 3.3 years ago by 45k • written 9.9 years ago by ★ 1.9k
0
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2
replies
3.1k
views
maSigPro warnings in glm.fit
rnaseq glm.fit masigpro
updated 3.3 years ago by 45k • written 9.9 years ago by ★ 1.9k
0
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1
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7.8k
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Comment: C: fastqc Exception in thread "Thread-1" (error)
10.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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2
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7.8k
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Comment: C: fastqc Exception in thread "Thread-1" (error)
10.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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7
replies
7.8k
views
fastqc Exception in thread "Thread-1" (error)
fastq fastqc
10.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.3k
views
Comment: C: HOWTO get alternative splicing event for a specific gene
10.0 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
2
replies
2.3k
views
HOWTO get alternative splicing event for a specific gene
UCSC splice-variants alternative-splicing
updated 3.2 years ago by 45k • written 10.0 years ago by ★ 1.9k
0
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0
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1.8k
views
COMPLEAT analysis - Score calculation
enrichment COMPLEAT protein
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 1.9k
2
votes
5
replies
4.3k
views
Illumina Sentrix Beads Arrays
illumina
updated 10.4 years ago by 10k • written 13.2 years ago by ★ 1.9k
2
votes
5
replies
4.0k
views
QuasiSeq vs. DESeq2 results
deseq2 normalisation quasiseq erccdashboard
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
1
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1
reply
4.6k
views
Comment: C: CLC GW vs. tophat2
10.4 years ago by Assa Yeroslaviz ★ 1.9k
10
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10
replies
4.6k
views
CLC GW vs. tophat2
tophat CLC fastqc
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 1.9k
1
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1
reply
4.6k
views
Comment: C: CLC GW vs. tophat2
10.4 years ago by Assa Yeroslaviz ★ 1.9k
1
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0
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4.6k
views
Comment: C: CLC GW vs. tophat2
10.4 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
0
replies
4.6k
views
Comment: C: CLC GW vs. tophat2
10.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
4.0k
views
Comment: Comment: QuasiSeq vs. DESeq2 results
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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1
reply
4.0k
views
Comment: Comment: QuasiSeq vs. DESeq2 results
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
3
votes
20
replies
7.0k
views
Removing bacterial contamination of mouse gut sequences through metagenomic techniques
metagenomics de-novo blast RNA-Seq
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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0
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7.0k
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Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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1
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7.0k
views
Comment: C: metagenomics of gut sequences
10.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
7.0k
views
Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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1
reply
7.0k
views
Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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1
reply
7.0k
views
Comment: C: metagenomics of gut sequences
10.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
7.0k
views
Comment: C: metagenomics of gut sequences
10.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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7.0k
views
Comment: C: metagenomics of gut sequences
10.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
7.0k
views
Comment: C: metagenomics of gut sequences
10.5 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
4.6k
views
Comment: Comment: analysing RNASeq with spike-In
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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0
replies
16k
views
Comment: Comment: Normalization Of Rna Sequencing Counts (By Ercc / Gene Length)
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
votes
0
replies
3.0k
views
lowess normalization of FPKM
lowess FPKM cuffdiff cuffdif
updated 2.8 years ago by 45k • written 10.5 years ago by ★ 1.9k
0
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0
replies
2.9k
views
comparing count data with a vector of quantitative Scores
score correlation regression
10.5 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
16k
views
Comment: C: Normalization Of Rna Sequencing Counts (By Ercc / Gene Length)
10.6 years ago by Assa Yeroslaviz ★ 1.9k
21
votes
9
replies
27k
views
Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
fastqc pipeline
updated 3.5 years ago by 45k • written 12.0 years ago by ★ 1.9k
0
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0
replies
11k
views
Comment: Comment: filter out fasta File by pattern
updated 3.5 years ago by 45k • written 10.7 years ago by ★ 1.9k
0
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0
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3.9k
views
Comment: Comment: converting ensembl IDs to Entrez Ids with eutils
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.9k
0
votes
1
reply
3.9k
views
Comment: Comment: converting ensembl IDs to Entrez Ids with eutils
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.9k
2
votes
6
replies
3.9k
views
converting ensembl IDs to Entrez Ids with eutils
eutils entrez ensembl conversion biomaRt
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.9k
0
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1
reply
3.9k
views
Comment: C: converting ensembl IDs to Entrez Ids with eutils
10.8 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
0
replies
5.7k
views
Comment: Comment: Circos plot heatmap
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.9k
1
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1
reply
5.7k
views
Comment: Comment: Circos plot heatmap
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 1.9k
0
votes
0
replies
3.3k
views
DEXSeq error: Count files do not correspond to the flattened annotation file
dexseq gtf
updated 3.7 years ago by 45k • written 11.0 years ago by ★ 1.9k
0
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0
replies
3.7k
views
Comment: C: DEXSeq with cufflinks gtf file
11.0 years ago by Assa Yeroslaviz ★ 1.9k
6
votes
7
replies
3.7k
views
DEXSeq with cufflinks gtf file
cuffmerge DEXSeq cufflinks gtf
updated 3.8 years ago by 45k • written 11.0 years ago by ★ 1.9k
0
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0
replies
2.9k
views
Comment: Comment: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Fri
updated 4.6 years ago by 45k • written 11.0 years ago by ★ 1.9k
1
vote
0
replies
6.2k
views
Comment: Comment: question about drawing heatmap with R
updated 4.6 years ago by 45k • written 11.0 years ago by ★ 1.9k
622 results • Page 9 of 13
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