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Comment: Comment: Low mapping percentage
11 months ago by Dave Carlson ★ 1.7k
0
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0
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628
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Comment: Comment: Help with understanding BBduk's behavior
11 months ago by Dave Carlson ★ 1.7k
1
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2
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628
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Help with understanding BBduk's behavior
BBduk kmer
11 months ago by Dave Carlson ★ 1.7k
1
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1
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757
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Comment: Comment: BBduk log and stats appear to be inconsistent
12 months ago by Dave Carlson ★ 1.7k
4
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3
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757
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BBduk log and stats appear to be inconsistent
bbduk bbmap
updated 12 months ago by 142k • written 12 months ago by ★ 1.7k
0
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0
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893
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Answer: Answer: How much resources does HiCanu need to assemble PacBio sequence
12 months ago by Dave Carlson ★ 1.7k
0
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1
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917
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Comment: Comment: Hoe calculate RPKM from RUVr?
12 months ago by Dave Carlson ★ 1.7k
4
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0
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2.5k
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
13 months ago by Dave Carlson ★ 1.7k
0
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0
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658
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Answer: Answer: Journey from gene id to gene sequence
14 months ago by Dave Carlson ★ 1.7k
2
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0
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1.1k
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Comment: Comment: What is the importance of partitions in phylogenomics analysis ?
15 months ago by Dave Carlson ★ 1.7k
1
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1
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928
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Comment: Comment: Use an annotated transcript in STAR but no .gtf file available
15 months ago by Dave Carlson ★ 1.7k
2
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1
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928
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Answer: Answer: Use an annotated transcript in STAR but no .gtf file available
15 months ago by Dave Carlson ★ 1.7k
2
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1
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1.3k
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Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
16 months ago by Dave Carlson ★ 1.7k
1
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0
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544
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Answer: Answer: Structure: not found
17 months ago by Dave Carlson ★ 1.7k
1
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0
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1.0k
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Comment: Comment: runing R script on VCF dile in ubuntu
17 months ago by Dave Carlson ★ 1.7k
1
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1
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1.9k
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Answer: Answer: AlphaFold 2 alternatives
17 months ago by Dave Carlson ★ 1.7k
2
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0
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1.3k
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Comment: Comment: fastqc - typical for Illumina seq?
17 months ago by Dave Carlson ★ 1.7k
2
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0
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547
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Answer: Answer: Quickly examining many MSAs
17 months ago by Dave Carlson ★ 1.7k
0
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1
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1.5k
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Answer: Answer: How to extract the GT from a given sample in a multisample VCF with cyvcf2?
17 months ago by Dave Carlson ★ 1.7k
0
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0
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1.1k
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Comment: Comment: Multiple-way Reciprocal Best BLAST Hits
17 months ago by Dave Carlson ★ 1.7k
0
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1
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945
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Comment: Comment: Does missing data(?) have a significant impact on phylogenetic studies?
18 months ago by Dave Carlson ★ 1.7k
0
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1
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945
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Comment: Comment: Does missing data(?) have a significant impact on phylogenetic studies?
18 months ago by Dave Carlson ★ 1.7k
1
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0
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5.5k
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Comment: Comment: How can I learn create a bioinformatic pipeline?
18 months ago by Dave Carlson ★ 1.7k
0
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1
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1.2k
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Comment: Comment: genotype encoding
19 months ago by Dave Carlson ★ 1.7k
0
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1
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1.2k
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Comment: Comment: genotype encoding
19 months ago by Dave Carlson ★ 1.7k
2
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2
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1.2k
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Answer: Answer: genotype encoding
19 months ago by Dave Carlson ★ 1.7k
0
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1
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760
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Answer: Answer: How do I change the path of the bowtie2 temp file
19 months ago by Dave Carlson ★ 1.7k
1
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0
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811
views
Comment: Comment: How to fix plotMA() error?
19 months ago by Dave Carlson ★ 1.7k
2
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2
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811
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Answer: Answer: How to fix plotMA() error?
19 months ago by Dave Carlson ★ 1.7k
0
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0
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1.3k
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Comment: Comment: In-paralog & out-paralog
19 months ago by Dave Carlson ★ 1.7k
0
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1
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1.3k
views
Answer: Answer: In-paralog & out-paralog
19 months ago by Dave Carlson ★ 1.7k
2
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1
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2.4k
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Answer: Answer: phylogeny
updated 3 months ago by 43k • written 19 months ago by ★ 1.7k
0
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1
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1.2k
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Answer: Answer: Best software to edit phylogeny trees
20 months ago by Dave Carlson ★ 1.7k
1
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1
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804
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Comment: Comment: RNASeq analysis without reference genome using Trinity
20 months ago by Dave Carlson ★ 1.7k
1
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1
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1.4k
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Answer: Answer: Calculate inbreeding coefficient out of ROH (Plink)
20 months ago by Dave Carlson ★ 1.7k
1
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0
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586
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Answer: Answer: Identifying reliable regions of reference genomes
20 months ago by Dave Carlson ★ 1.7k
2
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1
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1.1k
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Comment: Comment: Reference genome fasta file
20 months ago by Dave Carlson ★ 1.7k
4
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1
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1.1k
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Answer: Answer: Reference genome fasta file
20 months ago by Dave Carlson ★ 1.7k
2
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1
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749
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Answer: Answer: Bowtie2 and subprocess issue
21 months ago by Dave Carlson ★ 1.7k
2
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1
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1.9k
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Answer: Answer: How to check Burrows-Wheeler Aligner (BWA) version on my terminal?
21 months ago by Dave Carlson ★ 1.7k
1
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1
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2.0k
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Answer: Answer: Conda environment perl issue
21 months ago by Dave Carlson ★ 1.7k
2
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0
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2.2k
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Comment: Comment: AF = 0.5 in chrX, VCF of a male
21 months ago by Dave Carlson ★ 1.7k
2
votes
0
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748
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Answer: Answer: How to create a fasta file using a list of DNA sequences data
21 months ago by Dave Carlson ★ 1.7k
0
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0
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679
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Comment: Comment: VCF to MAF using oncotator
21 months ago by Dave Carlson ★ 1.7k
2
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1
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2.2k
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Comment: Comment: Updating BLAST+ and PATH variable
21 months ago by Dave Carlson ★ 1.7k
3
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1
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2.2k
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Comment: Comment: Updating BLAST+ and PATH variable
21 months ago by Dave Carlson ★ 1.7k
5
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1
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2.2k
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Answer: Answer: Updating BLAST+ and PATH variable
21 months ago by Dave Carlson ★ 1.7k
0
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1
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1.5k
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Comment: Comment: iqtree output as newick or nexus format
21 months ago by Dave Carlson ★ 1.7k
0
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1
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1.5k
views
Answer: Answer: iqtree output as newick or nexus format
21 months ago by Dave Carlson ★ 1.7k
1
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0
replies
1.3k
views
Comment: Comment: Batch concatenate fastq files in series?
21 months ago by Dave Carlson ★ 1.7k
188 results • Page 2 of 4
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