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0
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1
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6.5k
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Comment:
Comment: Repeat masked gtf files from ensembl
17 months ago by
liorglic
★ 1.4k
3
votes
1
reply
552
views
Quickly examining many MSAs
MSA
updated 18 months ago by
Dave Carlson
★ 1.7k • written 18 months ago by
liorglic
★ 1.4k
0
votes
0
replies
1.1k
views
Comment:
Comment: Reciprocal (Multiple-way) Best BLAST Hits
18 months ago by
liorglic
★ 1.4k
0
votes
1
reply
1.1k
views
Comment:
Comment: Multiple-way Reciprocal Best BLAST Hits
18 months ago by
liorglic
★ 1.4k
0
votes
0
replies
1.3k
views
Comment:
Comment: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
18 months ago by
liorglic
★ 1.4k
0
votes
0
replies
1.3k
views
Comment:
Comment: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
18 months ago by
liorglic
★ 1.4k
1
vote
1
reply
1.3k
views
Answer:
Answer: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
updated 3 months ago by
Ram
43k • written 18 months ago by
liorglic
★ 1.4k
1
vote
2
replies
2.8k
views
Comment:
Comment: Why we use adjusted p-value not p-value in differential gene expression analysis
18 months ago by
liorglic
★ 1.4k
2
votes
1
reply
2.2k
views
Comment:
Comment: IGV visualization pattern for RNA-Seq mapping
18 months ago by
liorglic
★ 1.4k
0
votes
0
replies
1.9k
views
Answer:
Answer: FASTA to GTF/GFF using reference genome
18 months ago by
liorglic
★ 1.4k
1
vote
1
reply
1.2k
views
Comment:
Comment: Improving existing genome with new RNA-seq data
18 months ago by
liorglic
★ 1.4k
1
vote
0
replies
716
views
Answer:
Answer: Remove part of a header in a fasta file
18 months ago by
liorglic
★ 1.4k
1
vote
1
reply
2.2k
views
Comment:
Comment: IGV visualization pattern for RNA-Seq mapping
18 months ago by
liorglic
★ 1.4k
1
vote
1
reply
1.2k
views
Comment:
Comment: Improving existing genome with new RNA-seq data
18 months ago by
liorglic
★ 1.4k
1
vote
0
replies
706
views
Answer:
Answer: Find mate reads in two different pair-end reads files.
18 months ago by
liorglic
★ 1.4k
0
votes
0
replies
1.0k
views
Answer:
Answer: align kmers to reference genome
19 months ago by
liorglic
★ 1.4k
0
votes
1
reply
1.8k
views
Comment:
Comment: Antismash on Fasta files
19 months ago by
liorglic
★ 1.4k
0
votes
0
replies
1.7k
views
Comment:
Comment: Tool for extracting part of aligned sequence by CIGAR string
19 months ago by
liorglic
★ 1.4k
0
votes
1
reply
1.2k
views
Comment:
Comment: In GWAS Analysis, my top most significant SNPs from pre-imputation data does not
19 months ago by
liorglic
★ 1.4k
0
votes
0
replies
2.2k
views
Comment:
Comment: How can i find longest sequence in fasta file on terminal
20 months ago by
liorglic
★ 1.4k
0
votes
1
reply
2.3k
views
Comment:
Comment: fast way to get last position in a large indexed VCF?
20 months ago by
liorglic
★ 1.4k
2
votes
0
replies
946
views
Answer:
Answer: augustus gene prediction
20 months ago by
liorglic
★ 1.4k
0
votes
0
replies
638
views
Comment:
Comment: Construct a phylogenetic tree of apes
20 months ago by
liorglic
★ 1.4k
0
votes
1
reply
638
views
Comment:
Comment: Construct a phylogenetic tree of apes
20 months ago by
liorglic
★ 1.4k
0
votes
1
reply
2.4k
views
Comment:
Comment: augustus installation with conda
20 months ago by
liorglic
★ 1.4k
0
votes
1
reply
2.2k
views
Answer:
Answer: How can i find longest sequence in fasta file on terminal
20 months ago by
liorglic
★ 1.4k
1
vote
1
reply
1.4k
views
Comment:
Comment: Extract paired-end reads with one end falls within a given region from a bam fil
20 months ago by
liorglic
★ 1.4k
8
votes
13
replies
2.9k
views
8 follow
Forum:
Commercial software for genomics / NGS / bioinformatics
NGS
software
genomics
updated 20 months ago by
artem barski
• 0 • written 20 months ago by
liorglic
★ 1.4k
0
votes
1
reply
2.9k
views
Comment:
Comment: Commercial software for genomics / NGS / bioinformatics
20 months ago by
liorglic
★ 1.4k
0
votes
2
replies
2.9k
views
Comment:
Comment: Commercial software for genomics / NGS / bioinformatics
20 months ago by
liorglic
★ 1.4k
0
votes
0
replies
743
views
Comment:
Comment: SNP calling from plant whole genome assemblies
22 months ago by
liorglic
★ 1.4k
0
votes
2
replies
743
views
SNP calling from plant whole genome assemblies
calling
snp
whole
assembly
genome
22 months ago by
liorglic
★ 1.4k
1
vote
0
replies
2.2k
views
Comment:
Comment: convert csv to fasta format using python
24 months ago by
liorglic
★ 1.4k
0
votes
1
reply
701
views
Comment:
Comment: URGENT : GC @5,20,50 : Fraction of GC content in the bases around the variant po
2.0 years ago by
liorglic
★ 1.4k
2
votes
1
reply
1.6k
views
Answer:
Answer: How to create a phylogenetic tree from 30 VCF files
2.0 years ago by
liorglic
★ 1.4k
0
votes
0
replies
710
views
Comment:
Comment: Sort the fasta sequences based on the desired amino acid content
2.1 years ago by
liorglic
★ 1.4k
1
vote
1
reply
881
views
Comment:
Comment: Is it possible to create a phylogenetic tree based on 10 proteins per organism
2.1 years ago by
liorglic
★ 1.4k
0
votes
1
reply
2.3k
views
Answer:
Answer: How to merge the annotation from different softwares?
2.1 years ago by
liorglic
★ 1.4k
0
votes
1
reply
881
views
Comment:
Comment: Is it possible to create a phylogenetic tree based on 10 proteins per organism
2.1 years ago by
liorglic
★ 1.4k
0
votes
0
replies
574
views
Comment:
Comment: Over view informations about my genomes
2.1 years ago by
liorglic
★ 1.4k
4
votes
0
replies
1.9k
views
Answer:
Answer: Build Phylogenetic Tree from SNPs
2.1 years ago by
liorglic
★ 1.4k
0
votes
0
replies
1.0k
views
Comment:
Comment: vg for gene presence-absence analysis
2.1 years ago by
liorglic
★ 1.4k
0
votes
2
replies
1.0k
views
vg for gene presence-absence analysis
vg
pan-genome
vgteam
PAV
graph
variation
2.1 years ago by
liorglic
★ 1.4k
2
votes
2
replies
897
views
Unable to parse Open Tree of Life Newick with ete3 (python)
newick
python
ete3
updated 2.1 years ago by
Joe
21k • written 2.1 years ago by
liorglic
★ 1.4k
1
vote
0
replies
897
views
Answer:
Answer: Unable to parse Open Tree of Life Newick with ete3 (python)
2.1 years ago by
liorglic
★ 1.4k
0
votes
1
reply
703
views
Comment:
Comment: DGE - command line alternatives to R packages?
2.2 years ago by
liorglic
★ 1.4k
0
votes
4
replies
703
views
DGE - command line alternatives to R packages?
DGE
CLI
RNA-seq
R
updated 2.2 years ago by
LauferVA
4.2k • written 2.2 years ago by
liorglic
★ 1.4k
1
vote
2
replies
611
views
Running Galaxy tools on a HPC cluster using CLI?
galaxy
HPC
updated 2.2 years ago by
Wayne
★ 2.0k • written 2.2 years ago by
liorglic
★ 1.4k
0
votes
0
replies
759
views
Comment:
Comment: What metrics to use for comparing alignment-based methods and variant calling fo
2.2 years ago by
liorglic
★ 1.4k
3
votes
1
reply
1.8k
views
Answer:
Answer: What do we call a transcript?
2.2 years ago by
liorglic
★ 1.4k
282 results • Page
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