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Comment: C: If I have a hybrid yeast strain sequenced, is it okay to use saccer3 as referenc
6.5 years ago by grant.hovhannisyan ★ 2.6k
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6.2k
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Comment: C: Evolution of Biostars
6.6 years ago by grant.hovhannisyan ★ 2.6k
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3.3k
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Comment: C: for low coverage RNAseq how many reads assigned is the bare minimum for differen
6.6 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.8k
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Comment: C: Unequally pooling libraries for RNAseq?
6.6 years ago by grant.hovhannisyan ★ 2.6k
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1.7k
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Comment: C: Differential Expression of Single Gene
6.6 years ago by grant.hovhannisyan ★ 2.6k
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3.9k
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Comment: C: unmapped reads with pysam
6.6 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.5k
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same transcript id with STAR quant mode
RNA-Seq STAR gtf
updated 6.6 years ago by ★ 1.4k • written 7.8 years ago by ★ 2.6k
2
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1
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3.1k
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Comment: C: Is Dell Precision mobile workstation suitable for bioinformatics/NGS analysis
6.7 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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8.2k
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Comment: C: Alignment loop using STAR
6.7 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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28k
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Answer: A: Relation between Log2 Fold change and Log2 TPM in RNA-seq data
6.7 years ago by grant.hovhannisyan ★ 2.6k
0
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3.3k
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Comment: C: Using Fastqc To Check The Quality Of High Throughput Sequence
6.7 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.1k
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Answer: A: Can logCPM in edgeR be used to compare expression of different genes within samp
6.7 years ago by grant.hovhannisyan ★ 2.6k
0
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3
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1.3k
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Forum: costs for library preps
NGS
updated 2.3 years ago by 45k • written 6.8 years ago by ★ 2.6k
0
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0
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1.3k
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Comment: C: costs for library preps
6.8 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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3.9k
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Comment: C: Infer experiment - Failed to determine strandin paired end stranded RNA-seq
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.2k
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Answer: A: Do STAR genome index and RSEM reference need to be from same files?
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.7k
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Comment: C: AddHealth Omics Data Source
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.7k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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12k
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Comment: C: motif search with ATACseq
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.7k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.7k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.7k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
6.8 years ago by grant.hovhannisyan ★ 2.6k
1
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7
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3.7k
views
RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
RGT TF-footprinting ATAC-seq
updated 2.3 years ago by 45k • written 6.8 years ago by ★ 2.6k
0
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0
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2.7k
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Comment: C: Parsimony score of a NJ tree
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.7k
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Comment: C: Parsimony score of a NJ tree
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.7k
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Answer: A: Parsimony score of a NJ tree
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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6.2k
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Comment: C: To obtain upstream DNA sequence by giving location
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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6.2k
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Comment: C: To obtain upstream DNA sequence by giving location
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.9k
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Comment: C: DESEQ2 size factors change when number of samples change in the design
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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2
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11k
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Comment: C: Deseq2 : Filtering low counts before per sample
6.8 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.3k
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Comment: C: differently expressed genes
6.8 years ago by grant.hovhannisyan ★ 2.6k
2
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1
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1.4k
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Comment: C: Suggestion regarding DESeq design of experiment
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.4k
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Answer: A: Suggestion regarding DESeq design of experiment
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.7k
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Comment: C: Restriction in read name length
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.7k
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Comment: C: Restriction in read name length
6.9 years ago by grant.hovhannisyan ★ 2.6k
6
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6
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1.7k
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Restriction in read name length
read name
updated 6.9 years ago by 166k • written 6.9 years ago by ★ 2.6k
0
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0
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1.7k
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Comment: C: Restriction in read name length
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.7k
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Comment: C: RNA-Seq analysis = only 10 DE genes
6.9 years ago by grant.hovhannisyan ★ 2.6k
1
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1
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2.7k
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Comment: C: RNA-Seq analysis = only 10 DE genes
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.8k
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Comment: C: Most important International Big Data Projects: Genetics and Epigenetics
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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12k
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Comment: C: motif search with ATACseq
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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12k
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Comment: C: motif search with ATACseq
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.2k
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Comment: C: Specific DE comparisons with complex design matrix
6.9 years ago by grant.hovhannisyan ★ 2.6k
4
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3
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1.2k
views
Specific DE comparisons with complex design matrix
DESeq2
updated 6.9 years ago by 15k • written 6.9 years ago by ★ 2.6k
1
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0
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6.5k
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Comment: C: RNA-seq quantification Stringtie, featurecounts and HTSeq - am I correct?
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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12k
views
Comment: C: motif search with ATACseq
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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12k
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Comment: C: motif search with ATACseq
6.9 years ago by grant.hovhannisyan ★ 2.6k
12
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23
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12k
views
6 follow
motif search with ATAC-seq
motif-search ATAC-seq
updated 2.3 years ago by 45k • written 6.9 years ago by ★ 2.6k
2
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1
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5.1k
views
Answer: A: Number of reads per lane
6.9 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.8k
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Comment: C: GFF to BED
6.9 years ago by grant.hovhannisyan ★ 2.6k
458 results • Page 4 of 10
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