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1
vote
2
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18k
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Comment: C: Technical replicates in RNAseq
8.0 years ago by grant.hovhannisyan ★ 2.6k
47
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34
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18k
views
7 follow
Technical replicates in RNAseq
RNA-Seq technical_replicates
3.6 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.5k
views
Comment: C: Seq. depth for DE analysis
8.0 years ago by grant.hovhannisyan ★ 2.6k
1
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5
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2.5k
views
Seq. depth for DE analysis
DE-analysis RNA-Seq
updated 2.5 years ago by 45k • written 8.0 years ago by ★ 2.6k
0
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0
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2.5k
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Comment: C: Seq. depth for DE analysis
8.0 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.8k
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Comment: C: number of genes in human genome
8.0 years ago by grant.hovhannisyan ★ 2.6k
14
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9
replies
4.8k
views
number of genes in human genome
gene_id Ensembl
updated 8.0 years ago by 24k • written 8.0 years ago by ★ 2.6k
0
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0
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4.8k
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Comment: C: number of genes in human genome
8.0 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.8k
views
Comment: C: number of genes in human genome
8.0 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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1.7k
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Answer: A: Basic methods in ngs analysis
8.0 years ago by grant.hovhannisyan ★ 2.6k
0
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0
replies
1.9k
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Comment: C: ChipSeq multiplexing the number of TF
8.0 years ago by grant.hovhannisyan ★ 2.6k
0
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2
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1.9k
views
Comment: C: ChipSeq multiplexing the number of TF
8.0 years ago by grant.hovhannisyan ★ 2.6k
0
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1
reply
1.9k
views
Comment: C: ChipSeq multiplexing the number of TF
8.0 years ago by grant.hovhannisyan ★ 2.6k
4
votes
7
replies
1.9k
views
ChipSeq multiplexing the number of TF
chipseq TF
updated 8.0 years ago by 105k • written 8.0 years ago by ★ 2.6k
0
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0
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6.0k
views
Comment: C: predict TF binding sites from DNA sequence
8.0 years ago by grant.hovhannisyan ★ 2.6k
1
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2
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6.0k
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predict TF binding sites from DNA sequence
TF TRANSFAC TFBS binding-site
updated 17 months ago by 45k • written 8.0 years ago by ★ 2.6k
0
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1
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28k
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Answer: A: Best Free Text Editor For All Popular Languages (R, Python, Perl Etc..)
8.0 years ago by grant.hovhannisyan ★ 2.6k
1
vote
0
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11k
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Answer: A: How to find out the insert size in RNA seq data
8.0 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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3.9k
views
Answer: A: What is the reason why we usually use normalized values from RNA-Seq (FPKM, RPKM
8.0 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.0k
views
Answer: A: Phylogenetic Tree construction
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.9k
views
Comment: C: weird STAR output, bash scripting problem
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
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1
reply
3.9k
views
Comment: C: weird STAR output, bash scripting problem
8.1 years ago by grant.hovhannisyan ★ 2.6k
3
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1
reply
3.9k
views
Answer: C: weird STAR output, bash scripting problem
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
votes
0
replies
2.0k
views
Comment: C: reverse_complement on mutated sequence Biopython
8.1 years ago by grant.hovhannisyan ★ 2.6k
2
votes
3
replies
2.0k
views
reverse_complement on mutated sequence Biopython
biopython reverse_complement
updated 8.1 years ago by 11k • written 8.1 years ago by ★ 2.6k
0
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0
replies
3.0k
views
Comment: C: DESEQ2 for ASE
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.0k
views
Comment: C: DESEQ2 for ASE
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.0k
views
Comment: C: DESEQ2 for ASE
8.1 years ago by grant.hovhannisyan ★ 2.6k
4
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8
replies
3.0k
views
DESEQ2 for ASE
Allele-specific expression RNA-Seq DESEQ2
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
votes
1
reply
6.1k
views
Comment: C: extract subset of sequence
8.1 years ago by grant.hovhannisyan ★ 2.6k
0
votes
1
reply
14k
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Comment: C: Read counts of STAR with gff file
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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1
reply
3.4k
views
Answer: A: RNAseq variant filtering criteria
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.8k
views
Comment: C: Modifying genome GTF file based on vcf information
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
replies
1.4k
views
incorporate indels to gtf/gff file
RNA-Seq VCF haplotype indels
8.2 years ago by grant.hovhannisyan ★ 2.6k
2
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0
replies
2.9k
views
Comment: C: Draw the phylogeny from RNA-Seq data
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
votes
0
replies
7.2k
views
Comment: C: gatk tool installation problem
8.2 years ago by grant.hovhannisyan ★ 2.6k
3
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1
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7.2k
views
Comment: C: gatk tool installation problem
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
replies
2.8k
views
Comment: C: Mapping Quality of reads with mismatches in STAR
8.2 years ago by grant.hovhannisyan ★ 2.6k
3
votes
2
replies
2.8k
views
Mapping Quality of reads with mismatches in STAR
STAR RNAseq MAPQ
updated 8.2 years ago by 105k • written 8.2 years ago by ★ 2.6k
0
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1
reply
2.9k
views
Comment: C: Draw the phylogeny from RNA-Seq data
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.3k
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Answer: A: gff3 to gtf
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
replies
2.7k
views
Comment: C: Are transcription factors some kind of eQTLs?
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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4.9k
views
Comment: C: fasta files: keep only lines containing certain characters + the respective sequ
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
votes
0
replies
8.5k
views
Answer: A: How to install Arlequin R package?
8.2 years ago by grant.hovhannisyan ★ 2.6k
1
vote
1
reply
4.9k
views
Comment: C: fasta files: keep only lines containing certain characters + the respective sequ
8.2 years ago by grant.hovhannisyan ★ 2.6k
1
vote
1
reply
3.9k
views
Comment: C: processing FASTA file
8.2 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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8.8k
views
Comment: C: Calculating Fst between different populations at a specific locus
8.2 years ago by grant.hovhannisyan ★ 2.6k
1
vote
0
replies
1.7k
views
Comment: C: CUfflink data for statistical test
8.2 years ago by grant.hovhannisyan ★ 2.6k
1
vote
0
replies
8.8k
views
Answer: A: Calculating Fst between different populations at a specific locus
8.2 years ago by grant.hovhannisyan ★ 2.6k
1
vote
0
replies
3.9k
views
Comment: C: Error HISAT2 output for HTseq-count
8.2 years ago by grant.hovhannisyan ★ 2.6k
458 results • Page 9 of 10
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