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1
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0
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4.1k
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Comment: C: Evolution of Biostars
5.2 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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2.6k
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Comment: C: for low coverage RNAseq how many reads assigned is the bare minimum for differen
5.2 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.2k
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Comment: C: Unequally pooling libraries for RNAseq?
5.2 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.3k
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Comment: C: Differential Expression of Single Gene
5.3 years ago by grant.hovhannisyan ★ 2.6k
3
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2
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2.7k
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unmapped reads with pysam
pysam
5.3 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.7k
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Comment: C: unmapped reads with pysam
5.3 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.2k
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same transcript id with STAR quant mode
RNA-Seq STAR gtf
updated 5.3 years ago by ★ 1.3k • written 6.5 years ago by ★ 2.6k
2
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1
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2.3k
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Comment: C: Is Dell Precision mobile workstation suitable for bioinformatics/NGS analysis
5.3 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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7.1k
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Comment: C: Alignment loop using STAR
5.3 years ago by grant.hovhannisyan ★ 2.6k
2
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0
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22k
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Answer: A: Relation between Log2 Fold change and Log2 TPM in RNA-seq data
5.3 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.7k
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Comment: C: Using Fastqc To Check The Quality Of High Throughput Sequence
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.6k
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Answer: A: Can logCPM in edgeR be used to compare expression of different genes within samp
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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3
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998
views
Forum: costs for library preps
NGS
updated 11 months ago by 43k • written 5.4 years ago by ★ 2.6k
0
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0
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998
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Comment: C: costs for library preps
5.4 years ago by grant.hovhannisyan ★ 2.6k
1
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0
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3.0k
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Comment: C: Infer experiment - Failed to determine strandin paired end stranded RNA-seq
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.7k
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Answer: A: Do STAR genome index and RSEM reference need to be from same files?
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.2k
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Comment: C: AddHealth Omics Data Source
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.1k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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8.4k
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Comment: C: motif search with ATACseq
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.1k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.1k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.1k
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Comment: C: RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
5.4 years ago by grant.hovhannisyan ★ 2.6k
1
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7
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3.1k
views
RGT TypeError: unsupported operand type(s) for +: 'NoneType' and 'int'
RGT TF-footprinting ATAC-seq
updated 11 months ago by 43k • written 5.4 years ago by ★ 2.6k
0
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0
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2.1k
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Comment: C: Parsimony score of a NJ tree
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.1k
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Comment: C: Parsimony score of a NJ tree
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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2.1k
views
Answer: A: Parsimony score of a NJ tree
5.4 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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3.7k
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Comment: C: To obtain upstream DNA sequence by giving location
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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3.7k
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Comment: C: To obtain upstream DNA sequence by giving location
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.1k
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Comment: C: DESEQ2 size factors change when number of samples change in the design
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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2
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9.5k
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Comment: C: Deseq2 : Filtering low counts before per sample
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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918
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Comment: C: differently expressed genes
5.5 years ago by grant.hovhannisyan ★ 2.6k
2
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1
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1.0k
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Comment: C: Suggestion regarding DESeq design of experiment
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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1
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1.0k
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Answer: A: Suggestion regarding DESeq design of experiment
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.2k
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Comment: C: Restriction in read name length
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.2k
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Comment: C: Restriction in read name length
5.5 years ago by grant.hovhannisyan ★ 2.6k
6
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6
replies
1.2k
views
Restriction in read name length
read name
updated 5.5 years ago by 161k • written 5.5 years ago by ★ 2.6k
0
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0
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1.2k
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Comment: C: Restriction in read name length
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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1.9k
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Comment: C: RNA-Seq analysis = only 10 DE genes
5.5 years ago by grant.hovhannisyan ★ 2.6k
1
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1
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1.9k
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Comment: C: RNA-Seq analysis = only 10 DE genes
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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2.0k
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Comment: C: Most important International Big Data Projects: Genetics and Epigenetics
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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8.4k
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Comment: C: motif search with ATACseq
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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1
reply
8.4k
views
Comment: C: motif search with ATACseq
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
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993
views
Comment: C: Specific DE comparisons with complex design matrix
5.5 years ago by grant.hovhannisyan ★ 2.6k
4
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3
replies
993
views
Specific DE comparisons with complex design matrix
DESeq2
updated 5.5 years ago by 14k • written 5.5 years ago by ★ 2.6k
1
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0
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5.7k
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Comment: C: RNA-seq quantification Stringtie, featurecounts and HTSeq - am I correct?
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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1
reply
8.4k
views
Comment: C: motif search with ATACseq
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
replies
8.4k
views
Comment: C: motif search with ATACseq
5.5 years ago by grant.hovhannisyan ★ 2.6k
12
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23
replies
8.4k
views
6 follow
motif search with ATAC-seq
motif-search ATAC-seq
updated 11 months ago by 43k • written 5.6 years ago by ★ 2.6k
2
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1
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4.3k
views
Answer: A: Number of reads per lane
5.5 years ago by grant.hovhannisyan ★ 2.6k
0
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0
replies
3.5k
views
Comment: C: GFF to BED
5.5 years ago by grant.hovhannisyan ★ 2.6k
458 results • Page 4 of 10
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