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7
votes
2
replies
1.1k
views
Where can I download some example BAM files?
ngs bam
updated 14 months ago by 11k • written 14 months ago by ▴ 700
0
votes
0
replies
1.6k
views
Comment: Comment: can't run Aracne -- Java error
23 months ago by Federico Giorgi ▴ 700
0
votes
0
replies
20k
views
Answer: Answer: HISAT error: Encountered internal HISAT2 exception (#1)
2.2 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
981
views
Comment: C: Metabolomics / Transcriptomics dataset?
2.6 years ago by Federico Giorgi ▴ 700
1
vote
3
replies
981
views
Metabolomics / Transcriptomics dataset?
RNA-Seq metabolomics transcriptomics dataset
updated 2.6 years ago by 3.4k • written 2.6 years ago by ▴ 700
4
votes
0
replies
604
views
News: Call for Bioinformatics Papers - Genes Special Issue
gene
updated 1 day ago by 39k • written 3.4 years ago by ▴ 700
3
votes
1
reply
11k
views
Answer: A: Blast Output With Species Name
updated 3.5 years ago by 39k • written 9.6 years ago by ▴ 700
0
votes
1
reply
4.1k
views
Answer: A: How Can I Run Estscan2 (Perl)
updated 3.5 years ago by 39k • written 11.6 years ago by ▴ 700
1
vote
2
replies
776
views
Consensus sequence from multiple BAM files on a single position
samtools bam mpileup
updated 3.7 years ago by ★ 1.0k • written 3.7 years ago by ▴ 700
3
votes
1
reply
22k
views
Answer: A: Vertebrate Subset Nr Database? Build My Own?
updated 3.7 years ago by 39k • written 9.3 years ago by ▴ 700
0
votes
0
replies
176k
views
Comment: C: How Do I Draw A Heatmap In R With Both A Color Key And Multiple Color Side Bars?
updated 4.0 years ago by 39k • written 10.2 years ago by ▴ 700
1
vote
0
replies
7.7k
views
Answer: A: Parsing Ace File To Fasta Formated Alignement
updated 4.8 years ago by 39k • written 11.6 years ago by ▴ 700
0
votes
0
replies
1.6k
views
Comment: C: Show RNASeq coverage distribution over transcript length
4.9 years ago by Federico Giorgi ▴ 700
1
vote
2
replies
1.6k
views
Show RNASeq coverage distribution over transcript length
RNA-Seq BAM sequencing Transcriptomics
updated 4.9 years ago by 8.4k • written 4.9 years ago by ▴ 700
2
votes
1
reply
2.4k
views
Answer: A: question about DiffBind
5.0 years ago by Federico Giorgi ▴ 700
14
votes
3
replies
50k
views
Answer: A: How To Download All Sra Samples At Once ?
5.0 years ago by Federico Giorgi ▴ 700
1
vote
1
reply
2.2k
views
Answer: A: how to find new transcript from bam file?
5.0 years ago by Federico Giorgi ▴ 700
0
votes
1
reply
12k
views
Answer: A: download from SRA
5.1 years ago by Federico Giorgi ▴ 700
5
votes
2
replies
1.7k
views
SNP/indel annotation in Arabidopsis
arabidopsis SNP indel varscan
updated 5.1 years ago by 16k • written 5.1 years ago by ▴ 700
4
votes
5
replies
3.4k
views
Differential Expression Analysis On Rpkms - Contrasts And Contrasts Of Contrasts
r rna
updated 5.3 years ago by 20 • written 11.2 years ago by ▴ 700
39
votes
17
replies
41k
views
13 follow
Extract Cds Fastas From A Gff Annotation + Reference Sequence
gff CDS
updated 4 months ago by 39k • written 11.0 years ago by ▴ 700
1
vote
0
replies
10k
views
Answer: A: Co-Expression Networks Of Rna-Seq
9.5 years ago by Federico Giorgi ▴ 700
4
votes
4
replies
11k
views
Blast Output With Species Name
blast metagenomics
9.6 years ago by Federico Giorgi ▴ 700
2
votes
1
reply
15k
views
Answer: A: Bowtie & Tophat
10.1 years ago by Federico Giorgi ▴ 700
3
votes
4
replies
2.1k
views
Running Tophat2 On Two Joined Genomes
tophat2 rnaseq bowtie bowtie2
updated 10.1 years ago by ▴ 10 • written 10.1 years ago by ▴ 700
0
votes
1
reply
2.1k
views
Comment: C: Running Tophat2 On Two Joined Genomes
10.1 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
7.8k
views
Comment: C: How Fundamental Is The 4 Gb Size Limit For Building Burrows-Wheeler Indices
10.1 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
11k
views
Comment: C: Hg19 Gene Annotation With Tophat/Cufflinks
10.5 years ago by Federico Giorgi ▴ 700
2
votes
0
replies
4.9k
views
Answer: A: Fold Change Detection In Affymetrix Microarray Data Without Replicates
10.7 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
2.6k
views
Comment: C: Custom Cdf Pipeline
10.9 years ago by Federico Giorgi ▴ 700
1
vote
1
reply
2.2k
views
Comment: C: Basic Question : #Reads Used By Tophat
10.9 years ago by Federico Giorgi ▴ 700
4
votes
0
replies
4.9k
views
Comment: C: How Are Transposable Elements Marked In A Genome?
10.9 years ago by Federico Giorgi ▴ 700
0
votes
2
replies
2.6k
views
Custom Cdf Pipeline
microarray annotation
updated 10.9 years ago by ▴ 670 • written 10.9 years ago by ▴ 700
6
votes
1
reply
41k
views
Answer: A: Extract Cds Fastas From A Gff Annotation + Reference Sequence
11.0 years ago by Federico Giorgi ▴ 700
0
votes
1
reply
41k
views
Comment: C: Extract Cds Fastas From A Gff Annotation + Reference Sequence
11.0 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
3.4k
views
Answer: A: Differential Expression Analysis On Rpkms - Contrasts And Contrasts Of Contrasts
11.2 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
3.4k
views
Comment: C: Differential Expression Analysis On Rpkms - Contrasts And Contrasts Of Contrasts
11.2 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
3.4k
views
Comment: C: Differential Expression Analysis On Rpkms - Contrasts And Contrasts Of Contrasts
11.2 years ago by Federico Giorgi ▴ 700
1
vote
0
replies
2.6k
views
Gene To Goslim Mapping
gene r bioconductor
11.3 years ago by Federico Giorgi ▴ 700
7
votes
7
replies
2.3k
views
Gbrowse2 Mysql Indexing
mysql
updated 11.5 years ago by ▴ 750 • written 11.5 years ago by ▴ 700
0
votes
0
replies
2.3k
views
Comment: C: Gbrowse2 Mysql Indexing
11.5 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
2.3k
views
Comment: C: Gbrowse2 Mysql Indexing
11.5 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
2.3k
views
Comment: C: Gbrowse2 Mysql Indexing
11.5 years ago by Federico Giorgi ▴ 700
0
votes
0
replies
9.7k
views
Answer: A: Normalize Large Number Of Cel Files
11.6 years ago by Federico Giorgi ▴ 700
44 results • Page 1 of 1
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