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Comment: Comment: passing a third-party GFA to vg tools
2.7 years ago by colindaven 8.1k
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Comment: Comment: vg augment/call - Excessively high memory usage for some chromosomes
2.7 years ago by colindaven 8.1k
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Answer: Answer: High-resolution annotation of LTR elements
2.7 years ago by colindaven 8.1k
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4.8k
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Comment: Comment: vg augment/call - Excessively high memory usage for some chromosomes
2.7 years ago by colindaven 8.1k
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5.1k
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Comment: Comment: Nextflow Singularity/Apptainer error: command not found
2.7 years ago by colindaven 8.1k
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4.8k
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Comment: Comment: vg augment/call - Excessively high memory usage for some chromosomes
2.7 years ago by colindaven 8.1k
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2
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4.8k
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Comment: Comment: vg call - Excessively high memory usage for some chromosomes
2.7 years ago by colindaven 8.1k
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974
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Answer: Answer: low featurecounts assignment rate despite of good mapping with STAR
2.7 years ago by colindaven 8.1k
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6.1k
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Answer: Answer: Using LiftOver to change genomic build
2.7 years ago by colindaven 8.1k
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13k
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Answer: Answer: making a BIGWIG from BAM file
2.7 years ago by colindaven 8.1k
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2.0k
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Answer: Answer: MissAssembly Correction
2.7 years ago by colindaven 8.1k
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1.6k
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Answer: Answer: Bowtie2 which reference is best ?
2.7 years ago by colindaven 8.1k
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1.5k
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Answer: Answer: How to convert a .gbk or .faa to .pep as well a .gbk or .gff to .bed?
2.8 years ago by colindaven 8.1k
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1.8k
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Answer: Answer: How to install `BETA` on linux server?
2.8 years ago by colindaven 8.1k
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6.6k
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Comment: Comment: Bioinformatics - how to start?
2.8 years ago by colindaven 8.1k
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1.1k
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Answer: Answer: Linux server Vs Linux pc
2.8 years ago by colindaven 8.1k
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1.5k
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Comment: Comment: What to do if hundreds or genes have no functional domain!
2.8 years ago by colindaven 8.1k
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1.5k
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Answer: Answer: What to do if hundreds or genes have no functional domain!
2.8 years ago by colindaven 8.1k
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1000
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Answer: Answer: carp reads in my bacterial small RNome
2.8 years ago by colindaven 8.1k
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930
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Comment: Comment: How I know the genome assembly quality by the low coverage Pacbio data ?
2.8 years ago by colindaven 8.1k
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1.0k
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Answer: Answer: Variant calling on synthesized DNA
2.8 years ago by colindaven 8.1k
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2.2k
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Answer: Answer: Error: ##fileformat=VCFv4.2 does not exist
2.8 years ago by colindaven 8.1k
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3.3k
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Answer: Answer: How to calculate Minion run time needed?
2.8 years ago by colindaven 8.1k
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1
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1.9k
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Answer: Answer: Error: Please supply a reference FASTA/GBK/EMBL file with --reference
2.8 years ago by colindaven 8.1k
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7.7k
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Answer: Answer: bedGraph to bigwig
2.8 years ago by colindaven 8.1k
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1.6k
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Comment: Comment: short read aligners 25-50bp BWA vs BWA-MEM vs Bowtie vs Bowtie2
2.8 years ago by colindaven 8.1k
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1.4k
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Comment: Comment: How to compare a Nanopore read (.fastq) to a genome assembly file (.fna)
2.8 years ago by colindaven 8.1k
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1
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2.1k
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Comment: Comment: Problem with NextDenovo fungal assembly
2.8 years ago by colindaven 8.1k
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1.8k
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Comment: Comment: rBCS & pyBCS: open-source packages to support interactive visualizations of sing
2.8 years ago by colindaven 8.1k
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2.1k
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Answer: Answer: Problem Facing in NextDenovo assembly
2.8 years ago by colindaven 8.1k
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1.6k
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Answer: Answer: get SNPs from draft genomes
2.8 years ago by colindaven 8.1k
2
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0
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888
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Answer: Answer: genes presence-absence analysis
2.8 years ago by colindaven 8.1k
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2.6k
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Comment: Comment: Tools / Packages to assess allele specific methylation?
2.9 years ago by colindaven 8.1k
1
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0
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1.0k
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Answer: Answer: Anyone can suggest tools for detection isoform in long-read sequencing
2.9 years ago by colindaven 8.1k
3
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1
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6.7k
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Answer: Answer: samtools sort operation very slow, bottle-neck is external hard drive?
2.9 years ago by colindaven 8.1k
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2.7k
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Comment: Comment: FastQC quality
2.9 years ago by colindaven 8.1k
1
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1
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2.7k
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Answer: Answer: FastQC quality
2.9 years ago by colindaven 8.1k
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2
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2.7k
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Comment: Comment: FastQC quality
2.9 years ago by colindaven 8.1k
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1
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2.6k
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Comment: Comment: Tools / Packages to assess allele specific methylation?
2.9 years ago by colindaven 8.1k
1
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1
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2.6k
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Answer: Answer: Tools / Packages to assess allele specific methylation?
2.9 years ago by colindaven 8.1k
0
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0
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4.0k
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Comment: Comment: nextflow script of RNA data analysis
2.9 years ago by colindaven 8.1k
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1
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4.0k
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Comment: Comment: nextflow script of RNA data analysis
2.9 years ago by colindaven 8.1k
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1
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4.0k
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Comment: Comment: nextflow script of RNA data analysis
2.9 years ago by colindaven 8.1k
2
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0
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2.2k
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Comment: Comment: wtdbg2: out of memory error
2.9 years ago by colindaven 8.1k
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1
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3.3k
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Answer: Answer: analyzing a read mapped file with python
2.9 years ago by colindaven 8.1k
1
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1
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4.0k
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Answer: Answer: nextflow script of RNA data analysis
2.9 years ago by colindaven 8.1k
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2
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2.2k
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Answer: Answer: wtdbg2: out of memory error
2.9 years ago by colindaven 8.1k
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0
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3.0k
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Comment: Comment: How to replace column values if equal specific value to specific character and i
2.9 years ago by colindaven 8.1k
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1
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1.8k
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Answer: Answer: vg rna index
2.9 years ago by colindaven 8.1k
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1.3k
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Answer: Answer: What is the best way to generate vcf for vg toolkit from raw sequences
2.9 years ago by colindaven 8.1k
1,118 results • Page 9 of 23
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