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Comment: C: Confusion regarding generating phylogenetic tree from snp data
5.8 years ago by JJ ▴ 680
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0
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7.1k
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Comment: C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by JJ ▴ 680
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1
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7.1k
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Comment: C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by JJ ▴ 680
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1
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7.1k
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Comment: C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.8 years ago by JJ ▴ 680
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7.1k
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Comment: C: Compute Phylogenetic Trees Using Snps Data (VCF files)
5.9 years ago by JJ ▴ 680
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0
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1.7k
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Comment: C: How can I compute if the co-occurrence of two TFBSs within a certain width in al
5.9 years ago by JJ ▴ 680
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0
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1.7k
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Comment: C: How can I compute if the co-occurrence of two TFBSs within a certain width in al
5.9 years ago by JJ ▴ 680
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4
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1.7k
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How can I compute if the co-occurrence of two TFBSs within a certain width in all promoters is larger than by chance?
sequence genome
updated 6.0 years ago by 14k • written 6.0 years ago by ▴ 680
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0
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1.9k
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Comment: C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by JJ ▴ 680
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0
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1.9k
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Comment: C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by JJ ▴ 680
0
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0
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1.9k
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Comment: C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by JJ ▴ 680
0
votes
1
reply
1.9k
views
Comment: C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by JJ ▴ 680
0
votes
3
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1.9k
views
Comment: C: Calculate if the co-occurring of two TFBSs is higher than one would expect by ch
6.0 years ago by JJ ▴ 680
7
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11
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1.9k
views
Calculate if the co-occurring of two TFBSs is higher than one would expect by chance within 1000bp of each other
sequence genome
updated 6.0 years ago by 35k • written 6.0 years ago by ▴ 680
0
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1
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1.8k
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Comment: C: Are maps of regulatory regions available for hg38?
6.0 years ago by JJ ▴ 680
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1
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1.8k
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Comment: C: Are maps of regulatory regions available for hg38?
6.0 years ago by JJ ▴ 680
5
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6
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1.8k
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Are maps of regulatory regions available for hg38?
sequence
updated 6.0 years ago by 82k • written 6.0 years ago by ▴ 680
1
vote
0
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2.9k
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Comment: C: Convert binding site formats from different databases and compare the motifs - a
6.0 years ago by JJ ▴ 680
3
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2
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2.9k
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Convert binding site formats from different databases and compare the motifs - any tools available?
sequence
6.0 years ago by JJ ▴ 680
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1
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3.1k
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Answer: A: Understanding VCF abbreviations
6.0 years ago by JJ ▴ 680
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0
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2.9k
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Comment: C: Scanning for TFBSs of known motifs in all human promoters
6.0 years ago by JJ ▴ 680
1
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0
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1.7k
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Answer: A: Extract number of SNPs for any given gene
6.0 years ago by JJ ▴ 680
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0
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2.2k
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Answer: A: HISAT2-StringTie-CuffDiff "Sam file doesn't appear to be correctly sorted"
6.0 years ago by JJ ▴ 680
1
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0
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810
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Answer: A: sequence for colorectal cancer
6.0 years ago by JJ ▴ 680
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1
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1.3k
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Comment: C: Need publicly available raw RNA-seq data generated by human cell lines
6.0 years ago by JJ ▴ 680
1
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0
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1.3k
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Comment: C: How should a query a gene type in multiple genomes?
6.0 years ago by JJ ▴ 680
0
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1
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2.9k
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Comment: C: Scanning for TFBSs of known motifs in all human promoters
6.0 years ago by JJ ▴ 680
0
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0
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2.9k
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Comment: C: Scanning for TFBSs of known motifs in all human promoters
6.0 years ago by JJ ▴ 680
11
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9
replies
2.9k
views
Scanning for TFBSs of known motifs in all human promoters
genome sequence
updated 6.0 years ago by 35k • written 6.0 years ago by ▴ 680
1
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1
reply
1.3k
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Answer: A: How should a query a gene type in multiple genomes?
6.0 years ago by JJ ▴ 680
0
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0
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2.2k
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Answer: A: extracting sequence from fast file
6.0 years ago by JJ ▴ 680
1
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0
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2.0k
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Comment: C: Gene Expression data and variants from the same fastqc raw file
6.0 years ago by JJ ▴ 680
2
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1
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2.0k
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Answer: A: Gene Expression data and variants from the same fastqc raw file
6.0 years ago by JJ ▴ 680
0
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0
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3.5k
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Comment: C: What are the requirements to use data generated in other microarray experiments
6.0 years ago by JJ ▴ 680
0
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0
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3.8k
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Comment: C: Deseq2 batch effect design issue
6.0 years ago by JJ ▴ 680
1
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1
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3.8k
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Answer: A: Deseq2 batch effect design issue
6.0 years ago by JJ ▴ 680
0
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0
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1.2k
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Answer: A: microarray data analysis
6.0 years ago by JJ ▴ 680
1
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1
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3.5k
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Answer: A: What are the requirements to use data generated in other microarray experiments
6.0 years ago by JJ ▴ 680
0
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0
replies
2.2k
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Answer: A: Where can I download homo sapiens gene locations file including ensembl gene id,
6.0 years ago by JJ ▴ 680
1
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0
replies
1.2k
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Comment: C: Tophat output problem
6.0 years ago by JJ ▴ 680
0
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1
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2.6k
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Comment: C: remove rrna from rna seq
6.0 years ago by JJ ▴ 680
0
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1
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2.6k
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Comment: C: remove rrna from rna seq
6.0 years ago by JJ ▴ 680
0
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1
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3.2k
views
Comment: C: Retrieve promoter sequences of all human genes
6.0 years ago by JJ ▴ 680
0
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0
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3.2k
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Comment: C: Retrieve promoter sequences of all human genes
6.0 years ago by JJ ▴ 680
5
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7
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3.2k
views
Retrieve promoter sequences of all human genes
sequence
updated 6.0 years ago by 141k • written 6.0 years ago by ▴ 680
0
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1
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3.2k
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Comment: C: Retrieve promoter sequences of all human genes
6.0 years ago by JJ ▴ 680
0
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1
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2.5k
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Comment: C: FeatureCounts fails to count fragments instead of reads
6.0 years ago by JJ ▴ 680
0
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1
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2.5k
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Answer: A: FeatureCounts fails to count fragments instead of reads
6.0 years ago by JJ ▴ 680
0
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0
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21k
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Comment: C: Is there a tool that sorts gtf files?
6.0 years ago by JJ ▴ 680
2
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0
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21k
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Comment: C: Is there a tool that sorts gtf files?
6.0 years ago by JJ ▴ 680
164 results • Page 2 of 4
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