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Is there any robust way to convert VCFs to SQL (for easier comparisons) in R or Ruby, Java and Python?
vcf sql ngs wgs
updated 7.1 years ago by ▴ 20 • written 7.7 years ago by • 0
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0
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1.2k
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Comment: C: Where to download vcf2sqlite tool and are there any similar available somewhere?
7.7 years ago by valentina_stepanenko • 0
0
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3
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1.2k
views
Where to download vcf2sqlite tool and are there any similar available somewhere?
vcf sql
7.7 years ago by valentina_stepanenko • 0
0
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0
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2.3k
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Comment: C: How to use SNPEff software for comparison of a set of 100 VCF files?
7.7 years ago by valentina_stepanenko • 0
0
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3
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2.3k
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How to use SNPEff software for comparison of a set of 100 VCF files?
SNP vcf
7.7 years ago by valentina_stepanenko • 0
0
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1
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1.5k
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Answer: A: How to use Varianttools sofwtare for comparing 50 VCF files to find unique diffe
7.7 years ago by valentina_stepanenko • 0
0
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4
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1.5k
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How to use Varianttools sofwtare for comparing 50 VCF files to find unique differences?
vcf wgs sequencing
7.7 years ago by valentina_stepanenko • 0
0
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0
replies
2.2k
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Comment: C: Is there any robust way to convert VCFs to SQL (for easier comparisons) in R or
7.7 years ago by valentina_stepanenko • 0
0
votes
0
replies
2.2k
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Comment: C: Is there any robust way to convert VCFs to SQL (for easier comparisons) in R or
7.7 years ago by valentina_stepanenko • 0
0
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0
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1.6k
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Comment: C: Are there any documentation and tutorials for the KNIME 4Bio and NGS nodes?
7.7 years ago by valentina_stepanenko • 0
0
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2
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1.6k
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Comment: A: Are there any documentation and tutorials for the KNIME 4Bio and NGS nodes?
7.7 years ago by valentina_stepanenko • 0
0
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7
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1.6k
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Are there any documentation and tutorials for the KNIME 4Bio and NGS nodes?
knime
7.7 years ago by valentina_stepanenko • 0
0
votes
1
reply
1.5k
views
Where to download Tavaxy software?
taverna tavaxy galaxy wgs ngs
7.7 years ago by valentina_stepanenko • 0
0
votes
1
reply
1.6k
views
Comment: C: Are there any documentation and tutorials for the KNIME 4Bio and NGS nodes?
7.7 years ago by valentina_stepanenko • 0
0
votes
1
reply
1.5k
views
Comment: C: What NGS tools management system has the largest built-in choice of aligners and
7.7 years ago by valentina_stepanenko • 0
1
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4
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1.5k
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What NGS tools management system has the largest built-in choice of aligners and variant callers?
ngs wgs knime taverna galaxy
7.7 years ago by valentina_stepanenko • 0
0
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0
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1.5k
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Where to put KNIME data (fastq and bam/sam files) to make NGS nodes working and how to write a path to data?
KNIME
7.7 years ago by valentina_stepanenko • 0
0
votes
1
reply
6.3k
views
Answer: A: Mauve installation fails in Windows 8
7.7 years ago by valentina_stepanenko • 0
0
votes
1
reply
969
views
Is there any novice method for finding similar VCF files, for their comparison to 100 items and more?
vcf wgs ngs
updated 7.7 years ago by • 0 • written 7.7 years ago by • 0
0
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0
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1.0k
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Is it adequate and rational to use VAAST software for comparing VCFs from tuberculosis microbe alignments and variant calling?
vcf wgs ngs
7.7 years ago by valentina_stepanenko • 0
0
votes
1
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2.3k
views
Comment: C: How to delete not necessary tools from the local Galaxy instance?
7.7 years ago by valentina_stepanenko • 0
2
votes
4
replies
2.3k
views
How to delete not necessary tools from the local Galaxy instance?
galaxy ngs wgs
updated 7.7 years ago by 104k • written 7.7 years ago by • 0
0
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0
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1.4k
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Answer: A: How to add BBMap and VarScan into the KNIME workflow?
7.7 years ago by valentina_stepanenko • 0
0
votes
2
replies
1.4k
views
How to add BBMap and VarScan into the KNIME workflow?
knime wgs ngs
7.7 years ago by valentina_stepanenko • 0
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