Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.2k
views
Comment: Comment: extract sequence from genome by region
4 months ago by Nitin Narwade ★ 1.6k
1
vote
0
replies
395
views
Comment: Comment: Psuedobulk analysis of single cell RNA-Seq data
4 months ago by Nitin Narwade ★ 1.6k
1
vote
0
replies
497
views
Comment: Comment: Can you help me to download list of miRNA from a SRA under a bioproject ?
5 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
497
views
Answer: Answer: Can you help me to download list of miRNA from a SRA under a bioproject ?
5 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
306
views
Comment: Comment: How to check for incorporation of plasmid DNA into human genomic DNA (ChIP-seq)
5 months ago by Nitin Narwade ★ 1.6k
1
vote
1
reply
418
views
Comment: Comment: How can I amend the output of a DIAMOND python script?
5 months ago by Nitin Narwade ★ 1.6k
1
vote
0
replies
648
views
Comment: Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
5 months ago by Nitin Narwade ★ 1.6k
1
vote
1
reply
648
views
Comment: Comment: Plotting a pvalue threshold for an FDR corrected pvalue <.05 when thats not pres
5 months ago by Nitin Narwade ★ 1.6k
2
votes
0
replies
580
views
Comment: Comment: Conda environment not named
5 months ago by Nitin Narwade ★ 1.6k
3
votes
1
reply
580
views
Answer: Answer: Conda environment not named
updated 5 months ago by 43k • written 6 months ago by ★ 1.6k
0
votes
0
replies
2.8k
views
Comment: Comment: Is it possible to predict functional profile of microbiome through 16S rRNA gene
6 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
695
views
Comment: Comment: Filtering CDS from a full mitogenome
9 months ago by Nitin Narwade ★ 1.6k
0
votes
2
replies
695
views
Comment: Comment: Filtering CDS from a full mitogenome
9 months ago by Nitin Narwade ★ 1.6k
0
votes
3
replies
644
views
Clinical cohort for cancer sequenced using scRNA-Seq
Clinical-Cohort scRNA-Seq
updated 9 months ago by ▴ 90 • written 9 months ago by ★ 1.6k
1
vote
0
replies
867
views
Comment: Comment: Database for cell lines, genes and proteins associated with them
9 months ago by Nitin Narwade ★ 1.6k
1
vote
1
reply
805
views
Answer: Answer: Cellchat log fold change
updated 7 months ago by 43k • written 9 months ago by ★ 1.6k
2
votes
0
replies
576
views
Comment: Comment: How to Load a Molecular Signature Database into clusterProfiler gseGO?
9 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
441
views
Comment: Comment: How to input margin to UpsetR figure
9 months ago by Nitin Narwade ★ 1.6k
1
vote
0
replies
539
views
Comment: Comment: automatic clustering annotation using python
9 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
644
views
Comment: Comment: Clinical cohort for cancer sequenced using scRNA-Seq
9 months ago by Nitin Narwade ★ 1.6k
1
vote
0
replies
624
views
Comment: Comment: Presence of ribosomal gene / mitochondrial gene enrichment in each cluster of sc
10 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
436
views
Comment: Comment: Define conditions based on high or low gene expression for scRNAseq analysis
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
880
views
Answer: Answer: scRNA-seq dataset comparison
10 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
1.6k
views
Comment: Comment: scrna seq analysis - doublets
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
1.6k
views
Comment: Comment: scrna seq analysis - doublets
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
1.6k
views
Comment: Comment: scrna seq analysis - doublets
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
1.6k
views
Comment: Comment: scrna seq analysis - doublets
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
880
views
Comment: Comment: scRNA-seq dataset comparison
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
973
views
Comment: Comment: clustering changes in complex heatmap everytime
10 months ago by Nitin Narwade ★ 1.6k
5
votes
0
replies
5.4k
views
Answer: Answer: Convert Human to Mouse Symbols
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
502
views
Comment: Comment: Mapping PWM of transcription factor motifs to the human genome
10 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
1.1k
views
Comment: Comment: After R studio update, restrict view of columns in dataframe.
10 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
907
views
Comment: Comment: CIBERSORTx p-values
10 months ago by Nitin Narwade ★ 1.6k
2
votes
1
reply
756
views
Comment: Comment: Extract geneID following GO enrichment analysis
10 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
872
views
Comment: Comment: annotating single-cell cluster from Drosophila melanogaster using SingleR?
10 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
872
views
Comment: Comment: annotating single-cell cluster from Drosophila melanogaster using SingleR?
10 months ago by Nitin Narwade ★ 1.6k
1
vote
1
reply
872
views
Comment: Comment: annotating single-cell cluster from Drosophila melanogaster using SingleR?
10 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
368
views
Getting additional positive regulons on enabling --all_modules option in pySCENIC
scRNA-Seq Regulon SCENIC GRN pySCENIC
updated 10 months ago by 43k • written 15 months ago by ★ 1.6k
0
votes
0
replies
2.7k
views
Comment: Comment: Cannot convert the inetgarted seurat object to the cds for monocle 3
19 months ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
2.7k
views
Comment: Comment: Cannot convert the inetgarted seurat object to the cds for monocle 3
19 months ago by Nitin Narwade ★ 1.6k
1
vote
1
reply
2.6k
views
Comment: Comment: loom file for rna velocity
19 months ago by Nitin Narwade ★ 1.6k
1
vote
1
reply
2.6k
views
Answer: Answer: loom file for rna velocity
19 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
955
views
Comment: Comment: calculateQCMetrics defunct, how to calculate the quality metrics by perCellQCMet
22 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
909
views
Comment: Comment: How do I resolve an integration error in Seurat?
22 months ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
1.0k
views
Comment: Comment: Can we use 'SCT normalization' to find anchors and 'LogNormalize' for the integr
2.1 years ago by Nitin Narwade ★ 1.6k
0
votes
1
reply
1.4k
views
Comment: Comment: Difference between number of cells predicted by two different versions of cellra
2.1 years ago by Nitin Narwade ★ 1.6k
0
votes
2
replies
1.0k
views
Can we use 'SCT normalization' to find anchors and 'LogNormalize' for the integration?
batch effect sample-specific scRNA-Seq Seurat
2.1 years ago by Nitin Narwade ★ 1.6k
6
votes
4
replies
1.4k
views
Difference between number of cells predicted by two different versions of cellranger
Cellranger scRNA-Seq
updated 2.1 years ago by ★ 16k • written 2.1 years ago by ★ 1.6k
1
vote
0
replies
1.3k
views
Answer: Answer: series matrix file or RAW file? which one in better
2.3 years ago by Nitin Narwade ★ 1.6k
0
votes
0
replies
3.5k
views
Comment: Comment: HOMER findMotifsGenome.pl to get the location of the motifs
2.4 years ago by Nitin Narwade ★ 1.6k
262 results • Page 1 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6