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5
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4
replies
7.0k
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Correct GC bias using read counts and Loess regression method
loess GC bias GC content read counts
updated 6.5 years ago by ▴ 130 • written 8.7 years ago by ▴ 30
0
votes
0
replies
1.3k
views
HMM for detecting CNVs from read count signal
readcount cnv hmm R
6.6 years ago by fatima.m.zare ▴ 30
0
votes
1
reply
4.7k
views
Comment: C: How can I split the soft clipped reads and map the splitted reads again.
7.5 years ago by fatima.m.zare ▴ 30
5
votes
5
replies
4.7k
views
How can I split the soft clipped reads and map the splitted reads again.
soft clipped reads. split reads unmapped reads
updated 7.5 years ago by ★ 3.0k • written 7.5 years ago by ▴ 30
2
votes
3
replies
3.6k
views
calculate mappability score for each window
mappability score bias mappability bias
updated 8.2 years ago by ▴ 220 • written 8.7 years ago by ▴ 30
0
votes
0
replies
7.0k
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Comment: C: Correct GC bias using read counts and Loess regression method
8.7 years ago by fatima.m.zare ▴ 30
0
votes
0
replies
12k
views
Comment: C: Compute Binned Gc-Normalized Read Counts From Bam File
8.7 years ago by fatima.m.zare ▴ 30
0
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0
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3.6k
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Comment: C: calculate mappability score for each window
8.7 years ago by fatima.m.zare ▴ 30
0
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0
replies
2.4k
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Comment: C: Mappability calculation after mapping with Bowtie2
8.7 years ago by fatima.m.zare ▴ 30
0
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0
replies
3.2k
views
Comment: C: Regions of extreme GC content
8.7 years ago by fatima.m.zare ▴ 30
0
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0
replies
3.2k
views
Comment: C: Regions of extreme GC content
8.7 years ago by fatima.m.zare ▴ 30
0
votes
0
replies
12k
views
Comment: C: Compute Binned Gc-Normalized Read Counts From Bam File
8.7 years ago by fatima.m.zare ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: Regions of extreme GC content
8.7 years ago by fatima.m.zare ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: Regions of extreme GC content
updated 8.7 years ago by 154k • written 8.7 years ago by ▴ 30
0
votes
1
reply
3.2k
views
Comment: C: Regions of extreme GC content
8.7 years ago by fatima.m.zare ▴ 30
0
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0
replies
2.2k
views
Comment: C: purify tumor samples and remove normal cells
8.8 years ago by fatima.m.zare ▴ 30
4
votes
6
replies
2.2k
views
purify tumor samples and remove normal cells
prurify tumor whole exome sequencing
updated 8.8 years ago by ▴ 310 • written 8.8 years ago by ▴ 30
0
votes
0
replies
2.2k
views
Comment: C: purify tumor samples and remove normal cells
8.8 years ago by fatima.m.zare ▴ 30
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