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2
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0
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8.7k
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Comment: C: To get genes for each clusters from heatmap
8.3 years ago by Zhilong Jia ★ 2.2k
0
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0
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50k
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Comment: C: Ensembl Ids To Gene Name Conversion
8.4 years ago by Zhilong Jia ★ 2.2k
0
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0
replies
1.5k
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What should be noted if analyzing the combination of lab-producing RNA-Seq data and open RNA-Seq data in GEO
rna-seq
8.6 years ago by Zhilong Jia ★ 2.2k
0
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1
reply
3.1k
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Comment: C: Use cmap with rna-seq results
8.7 years ago by Zhilong Jia ★ 2.2k
2
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0
replies
15k
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Answer: A: Gene names in Ballgown differential expression analysis
8.7 years ago by Zhilong Jia ★ 2.2k
0
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0
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20k
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Answer: A: Converting Protein Names To Gene Ids
8.8 years ago by Zhilong Jia ★ 2.2k
0
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0
replies
1.9k
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Answer: A: Get CMap data
8.9 years ago by Zhilong Jia ★ 2.2k
1
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1
reply
6.2k
views
Answer: A: Drugs with unknown mechanism of action
9.0 years ago by Zhilong Jia ★ 2.2k
0
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0
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3.7k
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Comment: C: Convert ATC to PubChem
9.1 years ago by Zhilong Jia ★ 2.2k
0
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1
reply
3.0k
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Comment: C: An error when using ENCODE-Phantompeakqualtools
9.1 years ago by Zhilong Jia ★ 2.2k
0
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0
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3.4k
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Comment: C: Differentially expressed gene clustering
9.3 years ago by Zhilong Jia ★ 2.2k
0
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1
reply
3.4k
views
Answer: A: Differentially expressed gene clustering
9.3 years ago by Zhilong Jia ★ 2.2k
1
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0
replies
1.7k
views
News: Connectivity Map Inference Challenge
multi-task statistics cmap drug
updated 2.6 years ago by 45k • written 9.4 years ago by ★ 2.2k
1
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0
replies
2.5k
views
Answer: A: Looking For A Great Book On The Drug Industry?
9.4 years ago by Zhilong Jia ★ 2.2k
1
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2
replies
3.0k
views
Answer: A: Perturbation scan id in Connectivity Map data
9.4 years ago by Zhilong Jia ★ 2.2k
0
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0
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14k
views
Comment: C: A list of Bioinformatics projects for volunteers
9.4 years ago by Zhilong Jia ★ 2.2k
35
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11
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14k
views
10 follow
Blog: A list of Bioinformatics projects for volunteers
volunteers project
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 2.2k
4
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0
replies
4.3k
views
Tool: Drug repositioning based on co-expressed gene set enrichment analysis, cogena
pathway-analysis cogena drug-repositioning
updated 3.4 years ago by 45k • written 10.6 years ago by ★ 2.2k
5
votes
3
replies
3.2k
views
In R, how to map gds ids to gse ids
GDS GEO GSE
updated 3.6 years ago by 45k • written 10.8 years ago by ★ 2.2k
0
votes
1
reply
18k
views
Comment: C: Combine lines into one line after specific line identifier
9.6 years ago by Zhilong Jia ★ 2.2k
1
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1
reply
18k
views
Answer: A: Combine lines into one line after specific line identifier
9.6 years ago by Zhilong Jia ★ 2.2k
0
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0
replies
4.5k
views
Answer: A: How can bioinformatics tools be grouped/divided into types?
9.6 years ago by Zhilong Jia ★ 2.2k
1
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0
replies
5.1k
views
Answer: A: Is there way to do batchquery and obtain ATC codes for pubchem CIDs?
9.6 years ago by Zhilong Jia ★ 2.2k
0
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0
replies
2.0k
views
Answer: A: gene list -interactions
9.6 years ago by Zhilong Jia ★ 2.2k
0
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1
reply
14k
views
Comment: C: A list of Bioinformatics projects for volunteers
9.6 years ago by Zhilong Jia ★ 2.2k
0
votes
1
reply
14k
views
Comment: C: A list of Bioinformatics projects for volunteers
9.6 years ago by Zhilong Jia ★ 2.2k
3
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5
replies
46k
views
how to set the size of cell of heatmap.2 in R
heatmap.2 R
updated 3.7 years ago by 45k • written 10.9 years ago by ★ 2.2k
0
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0
replies
2.6k
views
Answer: Answer: Is There Anyone Processing The Broad Cmap Data Knowing About The Meaning Of .Ho
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 2.2k
0
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1
reply
61k
views
Comment: Comment: R: How to convert log2FC (Fold Change) obtained by limma's topTable() function t
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 2.2k
2
votes
1
reply
2.0k
views
Answer: Answer: Connectivity Map: "invalid tag files: down tags: probe '211851_X_AT' invalid, no
updated 3.3 years ago by 45k • written 9.7 years ago by ★ 2.2k
2
votes
1
reply
2.8k
views
Filtering samples or not before normalisation for samples from several groups
gene-expression filter microarray normalisation
updated 3.3 years ago by 45k • written 9.8 years ago by ★ 2.2k
0
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0
replies
16k
views
Comment: C: in R, how to get the gene symbols of GPL
9.8 years ago by Zhilong Jia ★ 2.2k
0
votes
1
reply
2.0k
views
Forum: Differential expression analysis for samples from peripheral blood
R blood differential-expression-analsysis
updated 3.2 years ago by 45k • written 9.9 years ago by ★ 2.2k
3
votes
0
replies
3.3k
views
Answer: A: Searching Project in bioinformatics
10.0 years ago by Zhilong Jia ★ 2.2k
2
votes
6
replies
7.6k
views
Position Frequency Matrix to Position Weight Matrix, whose colsums need to be 1.
bioconductor motif PFM R PWM
updated 3.6 years ago by 45k • written 11.0 years ago by ★ 2.2k
0
votes
1
reply
5.7k
views
Comment: C: How do you define inter-disciplinary communication, how important are these skil
10.1 years ago by Zhilong Jia ★ 2.2k
0
votes
0
replies
4.1k
views
Answer: Answer: Finding the TFs that regulate a set of genes
updated 3.2 years ago by 45k • written 10.1 years ago by ★ 2.2k
1
vote
0
replies
2.6k
views
Answer: Answer: Network comparison by using network topological features.
updated 3.1 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
2.5k
views
Answer: A: Find genes correlate with a given gene in gene expression heatmap(data analysis)
10.1 years ago by Zhilong Jia ★ 2.2k
0
votes
0
replies
63k
views
Comment: C: How To Write Data In A Granges Object To A Bed File.
10.1 years ago by Zhilong Jia ★ 2.2k
3
votes
0
replies
4.3k
views
Tool: DNMF: Gene Ranking and differential expression analysis of RNA-Seq Data
gene-ranking NMF gsea RNA-Seq DNMF
updated 4.0 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
4.9k
views
Comment: C: How to enter the computational biology research field with a PhD in Neuroimaging
10.2 years ago by Zhilong Jia ★ 2.2k
0
votes
0
replies
4.9k
views
Comment: C: How to enter the computational biology research field with a PhD in Neuroimaging
10.2 years ago by Zhilong Jia ★ 2.2k
2
votes
0
replies
3.0k
views
Answer: Answer: Finding most co-expressed genes of input gene based on Pearson correlation
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 2.2k
0
votes
0
replies
31k
views
Comment: C: Input GSEA Pre-ranked list
10.2 years ago by Zhilong Jia ★ 2.2k
0
votes
0
replies
3.0k
views
Comment: Comment: what does lowess smoothed line show in a MA plot
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 2.2k
2
votes
7
replies
3.4k
views
which structure should be used for a drug (like fluvastatin) in chemoinformatics
chemistry chemoinformatics drug
updated 2.9 years ago by 45k • written 10.4 years ago by ★ 2.2k
0
votes
2
replies
3.0k
views
what does lowess smoothed line show in a MA plot
lowess microarry maplot
updated 3.1 years ago by 45k • written 10.2 years ago by ★ 2.2k
0
votes
0
replies
3.0k
views
Comment: C: Acceptability of R dropping zeros from logged RNAseq RPKM data
10.2 years ago by Zhilong Jia ★ 2.2k
0
votes
0
replies
3.0k
views
Comment: C: Acceptability of R dropping zeros from logged RNAseq RPKM data
10.2 years ago by Zhilong Jia ★ 2.2k
304 results • Page 4 of 7
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