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Detecting presence of UMI from BAM/fastq files without prior knowledge
fastq bam picard sequencing
updated 6 weeks ago by 19k • written 6 weeks ago by ▴ 10
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1
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3.7k
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Comment: Comment: GEM index fatal error
updated 3 months ago by 43k • written 3 months ago by ▴ 10
2
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1
reply
529
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Why extracting reads from BAM to fastq produces small amount of reads?
picard samtools BAM fastq
updated 8 months ago by 82k • written 8 months ago by ▴ 10
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1
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1.1k
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Comment: Comment: The most efficient way to take several random reads from CRAM file?
17 months ago by artemd ▴ 10
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6
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1.1k
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The most efficient way to take several random reads from CRAM file?
sequencing reads CRAM
updated 17 months ago by 100k • written 17 months ago by ▴ 10
0
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1
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1.1k
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Comment: Comment: The most efficient way to take several random reads from CRAM file?
17 months ago by artemd ▴ 10
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0
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1.8k
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Comment: Comment: MAPQ (Mapping quality) of 0 for most reads from BWA-MEM2 (with no secondary ali
2.6 years ago by artemd ▴ 10
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2
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1.8k
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Comment: Comment: MAPQ (Mapping quality) of 0 for most reads from BWA-MEM2 (with no secondary ali
2.6 years ago by artemd ▴ 10
1
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4
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1.8k
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MAPQ (Mapping quality) of 0 for most reads from BWA-MEM2 (with no secondary alignment or other apparent reason)
mapping bwa alignment genome sequencing
updated 2.6 years ago by 161k • written 2.6 years ago by ▴ 10
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0
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1.5k
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Comment: C: Edited Title: Finding differential sequence characteristics between two groups o
4.2 years ago by artemd ▴ 10
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1
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1.5k
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Comment: C: Edited Title: Finding differential sequence characteristics between two groups o
4.2 years ago by artemd ▴ 10
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0
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1.5k
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Comment: C: Edited Title: Finding differential sequence characteristics between two groups o
4.2 years ago by artemd ▴ 10
4
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14
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1.5k
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Edited Title: Finding differential sequence characteristics between two groups of sequences
genome sequence gene
4.2 years ago by artemd ▴ 10
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0
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1.5k
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Comment: C: sequence similarity analysis between groups of closely related DNA sequences
4.2 years ago by artemd ▴ 10
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1
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1.5k
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Comment: C: sequence similarity analysis between groups of closely related DNA sequences
4.2 years ago by artemd ▴ 10
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0
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1.5k
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Comment: C: sequence similarity analysis between groups of closely related DNA sequences
4.2 years ago by artemd ▴ 10
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0
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1.5k
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Comment: C: sequence similarity analysis between groups of closely related DNA sequences
4.2 years ago by artemd ▴ 10
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0
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3.5k
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Comment: C: How to convert extended CIGAR to regular CIGAR
7.2 years ago by artemd ▴ 10
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1
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3.5k
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Comment: C: How to convert extended CIGAR to regular CIGAR
7.2 years ago by artemd ▴ 10
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0
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3.5k
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Comment: C: How to convert extended CIGAR to regular CIGAR
7.2 years ago by artemd ▴ 10
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0
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3.5k
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Comment: C: How to convert extended CIGAR to regular CIGAR
7.2 years ago by artemd ▴ 10
13
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8
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3.5k
views
How to convert extended CIGAR to regular CIGAR
sam bam cigar CIGAR
updated 7.2 years ago by 161k • written 7.2 years ago by ▴ 10
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