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Comment:
C: How can I get true transcript_ids from StringTie?
4.8 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
764
views
Comment:
C: total RNA-seq public data with rRNA
4.9 years ago by
c.chakraborty
▴ 180
0
votes
2
replies
1.7k
views
Comment:
C: Analyzing LogRPKM Counts Data for finding DEGs(Differential Expressed Genes)
4.9 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
1.3k
views
Comment:
C: Processing gene expression data
4.9 years ago by
c.chakraborty
▴ 180
1
vote
1
reply
1.3k
views
Answer:
A: Processing gene expression data
4.9 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
2.5k
views
Comment:
C: .hic to .cool
4.9 years ago by
c.chakraborty
▴ 180
0
votes
2
replies
2.5k
views
.hic to .cool
HiC
r
updated 4.9 years ago by
zx8754
12k • written 4.9 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
3.6k
views
Answer:
A: DESeqDataSetFromMatrix giving an error
4.9 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
1.4k
views
Answer:
A: Meaningful DE using rpkm values in a RNA-Seq analysis
5.0 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
3.3k
views
Comment:
C: How to get the position of a transcript on chromosome with ncbi refseq_ncrna id?
5.2 years ago by
c.chakraborty
▴ 180
1
vote
1
reply
3.3k
views
Answer:
A: How to get the position of a transcript on chromosome with ncbi refseq_ncrna id?
5.2 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
1.5k
views
Comment:
C: RNA Seq analysis of rice samples
5.4 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
1.5k
views
Comment:
C: RNA Seq analysis of rice samples
5.4 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.5k
views
list to one fasta file
R
biomaR
FASTA
updated 5.4 years ago by
Ram
44k • written 5.5 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
1.5k
views
Answer:
A: Extract Ensembl IDs column using a data file
5.4 years ago by
c.chakraborty
▴ 180
2
votes
1
reply
1.2k
views
Answer:
A: Where Can I find protein-protein interactions data ?
5.8 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.2k
views
Answer:
A: Panther pathway gene list counts
5.8 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
5.6k
views
Answer:
A: gene expression analysis using RNA seq data
5.9 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.7k
views
Comment:
C: Gene (mRNA) - Protein Interaction databases and prediction
6.1 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
1.7k
views
Answer:
A: Gene (mRNA) - Protein Interaction databases and prediction
6.1 years ago by
c.chakraborty
▴ 180
3
votes
3
replies
1.9k
views
Equal distance between groups in a barplot
R
updated 6.1 years ago by
zx8754
12k • written 6.1 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
1.9k
views
Answer:
C: equal distance between groups in a barplot
updated 6.1 years ago by
zx8754
12k • written 6.1 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
4.4k
views
Comment:
C: length of a DNAString
6.1 years ago by
c.chakraborty
▴ 180
3
votes
3
replies
4.4k
views
length of a DNAString
using readDNAStringset-
R
biostrings
updated 6.1 years ago by
h.mon
35k • written 6.1 years ago by
c.chakraborty
▴ 180
0
votes
2
replies
1.3k
views
ArrayExpress dataset error
R
arrayexpress
updated 6.2 years ago by
h.mon
35k • written 6.2 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
1.3k
views
Answer:
A: combine RNA-seq data count and len
6.2 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.9k
views
Answer:
A: Pathway enrichment analysis of gene set
6.2 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
1.9k
views
Answer:
A: How to find common data in replicates?
updated 6.2 years ago by
zx8754
12k • written 6.2 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.3k
views
Answer:
A: GSEA Phenotype Table Input
6.2 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
10k
views
Answer:
A: Human Gene Regulatory Database
6.3 years ago by
c.chakraborty
▴ 180
1
vote
1
reply
1.2k
views
Answer:
A: Protein classification system
6.4 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
3.0k
views
Answer:
A: DNA Motif discovery from a large number of FASTA sequences
6.4 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
1.5k
views
Answer:
A: How to retrieve accession from Uniprot?
6.4 years ago by
c.chakraborty
▴ 180
0
votes
1
reply
3.0k
views
Comment:
A: DNA Motif discovery from a large number of FASTA sequences
6.4 years ago by
c.chakraborty
▴ 180
2
votes
0
replies
6.9k
views
Comment:
C: find transcription factors in a list of genes
6.4 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.6k
views
Answer:
A: RNA-seq of two non-model species: differential expression and FPKM
6.4 years ago by
c.chakraborty
▴ 180
2
votes
0
replies
6.9k
views
Answer:
A: find transcription factors in a list of genes
6.4 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.4k
views
Comment:
C: Gene expression study
6.5 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.4k
views
Comment:
C: Gene expression study
6.5 years ago by
c.chakraborty
▴ 180
0
votes
4
replies
1.4k
views
Gene expression study
RNA-Seq
next-gen
statistical significance
updated 6.5 years ago by
noorpratap.singh
▴ 330 • written 6.5 years ago by
c.chakraborty
▴ 180
1
vote
1
reply
3.3k
views
Answer:
A: Sanger Sequencing showing too much background noise?
6.5 years ago by
c.chakraborty
▴ 180
1
vote
0
replies
1.2k
views
Gene Ontology for DNA motifs
gene
genome
6.7 years ago by
c.chakraborty
▴ 180
0
votes
0
replies
1.2k
views
NsiteH, NSite and NSiteM
sequence
ChIP-Seq
6.7 years ago by
c.chakraborty
▴ 180
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