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Comment: Comment: Reformatting Merged and Unmerged Paired-End Files
6 weeks ago by young_bioinformatician ▴ 230
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Reformatting Merged and Unmerged Paired-End Files
illumina fastp fastqc bbmap
updated 6 weeks ago by 141k • written 6 weeks ago by ▴ 230
5
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5
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1.3k
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long view SNPs in vcf file
bcftools Variant-Calling SNP freebayes vcftools
updated 8 weeks ago by ▴ 10 • written 18 months ago by ▴ 230
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392
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Comment: Comment: Guided genome assembly
10 weeks ago by young_bioinformatician ▴ 230
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421
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Comment: Comment: eggNOG versus Diamond blastp
12 weeks ago by young_bioinformatician ▴ 230
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294
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Answer: Answer: Multimapped and unique mapped for BAM file of RRBS data
12 weeks ago by young_bioinformatician ▴ 230
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3
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421
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eggNOG versus Diamond blastp
diamond eggNOG protein functional
updated 12 weeks ago by ★ 2.5k • written 12 weeks ago by ▴ 230
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2
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607
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How to manage GO terms for metagenomics
metagenome gene-ontology GO
updated 12 weeks ago by ▴ 390 • written 18 months ago by ▴ 230
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1
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309
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Answer: Answer: move fasta and fastq files with the same name folder
3 months ago by young_bioinformatician ▴ 230
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925
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Answer: Answer: How to produce "publication quality figures" for MAGs from environmental samples
3 months ago by young_bioinformatician ▴ 230
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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23
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1.4k
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How to speed Salmon index up
metagenome genome salmon
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Answer: Answer: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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2
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
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0
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by young_bioinformatician ▴ 230
1
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2
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437
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Answer: Answer: Transcript Based Annotation of Variants Using Annovar
3 months ago by young_bioinformatician ▴ 230
2
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1
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886
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Answer: Answer: How To Choose Metagenomics Function annotation : Reads-based v.s. Contigs-based
12 months ago by young_bioinformatician ▴ 230
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0
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339
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How to handle KEGG orthologous IDs involved multiple pathways
KEGG annotation metagenome functional gene
14 months ago by young_bioinformatician ▴ 230
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1
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779
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Comment: Comment: Further Reducing Gene Ontology list
17 months ago by young_bioinformatician ▴ 230
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1.1k
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Comment: Comment: How to combine eggnog and interproscan
17 months ago by young_bioinformatician ▴ 230
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2
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1.1k
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How to combine eggnog and interproscan
pfam eggnog blast interproscan annotation
17 months ago by young_bioinformatician ▴ 230
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0
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3.6k
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Comment: Comment: Paired end reads merged to single end for mapping - should i allow multi-overlap
17 months ago by young_bioinformatician ▴ 230
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1.3k
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Comment: Comment: long view SNPs in vcf file
18 months ago by young_bioinformatician ▴ 230
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1.3k
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Comment: Comment: long view SNPs in vcf file
18 months ago by young_bioinformatician ▴ 230
0
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0
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646
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Comment: Comment: Change ploidy level in vcf file
updated 18 months ago by 2.8k • written 18 months ago by ▴ 230
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2
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646
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Change ploidy level in vcf file
vcf freebayes SNP vcftools bcftools
updated 18 months ago by 2.8k • written 18 months ago by ▴ 230
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2.0k
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Comment: Comment: How to create a basic GUI for rna seq pipeline
18 months ago by young_bioinformatician ▴ 230
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1
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1.5k
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Comment: Comment: Fasta headers column spilt or selection
19 months ago by young_bioinformatician ▴ 230
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0
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657
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Comment: Comment: variant analysis using Freebayes
19 months ago by young_bioinformatician ▴ 230
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0
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808
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Comment: Comment: Error loading a bam + bai files in IGV
19 months ago by young_bioinformatician ▴ 230
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0
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906
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Comment: Comment: When to use Genome assembly and when to use short read alignment for consensus g
19 months ago by young_bioinformatician ▴ 230
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1.9k
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Comment: Comment: PLINK - individual variance with the SNPs weights
19 months ago by young_bioinformatician ▴ 230
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1
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1.9k
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Comment: Comment: PLINK - individual variance with the SNPs weights
19 months ago by young_bioinformatician ▴ 230
0
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1
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1.9k
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Comment: Comment: PLINK - individual variance with the SNPs weights
19 months ago by young_bioinformatician ▴ 230
3
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6
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1.9k
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PLINK - individual variance with the SNPs weights
plink snp variant population pca
19 months ago by young_bioinformatician ▴ 230
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1
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856
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Comment: Comment: Normalization after Trimmomatic ?
22 months ago by young_bioinformatician ▴ 230
0
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0
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367
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How to (or not to) interpret the annotation abundance result from metagenome
gene abundance GO annotation metagenome
22 months ago by young_bioinformatician ▴ 230
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0
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1.2k
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Answer: Answer: MG RAST for Eukaryota
23 months ago by young_bioinformatician ▴ 230
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0
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708
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Comment: Comment: Considering two and more variation in polyploidy
24 months ago by young_bioinformatician ▴ 230
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1
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708
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Comment: Comment: Considering two and more variation in polyploidy
24 months ago by young_bioinformatician ▴ 230
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4
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708
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Considering two and more variation in polyploidy
Population SNP Variant genomic Calling
24 months ago by young_bioinformatician ▴ 230
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0
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711
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Comment: Comment: PCA biplot for SNPs data
2.2 years ago by young_bioinformatician ▴ 230
0
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2
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711
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PCA biplot for SNPs data
SNP Calling PCA Variant
2.2 years ago by young_bioinformatician ▴ 230
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0
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887
views
Comment: C: IDBA-UD Output Question
3.7 years ago by young_bioinformatician ▴ 230
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