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18
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Tutorial: Integrating VDJ sequencing data with Seurat
VDJ Seurat sc-RNAseq clonotyping
updated 12 months ago by 154k • written 6.3 years ago by ▴ 330
0
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0
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13k
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Comment: Comment: appending information to seurat object meta.data
4.2 years ago by atakanekiz ▴ 330
2
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0
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1.8k
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Tool: CIPR - Cluster Identity Predictor for scRNAseq experiments
scRNAseq R RNA-Seq shiny
updated 2.3 years ago by 45k • written 5.4 years ago by ▴ 330
1
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1
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13k
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Answer: Answer: appending information to seurat object meta.data
4.2 years ago by atakanekiz ▴ 330
0
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0
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19k
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Comment: C: Associating VDJ clonotyping data with scRNA-seq in Seurat
5.4 years ago by atakanekiz ▴ 330
0
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0
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20k
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Comment: C: Integrating VDJ sequencing data with Seurat
5.4 years ago by atakanekiz ▴ 330
1
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0
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1.9k
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Comment: C: Discrepancies in TCGAbiolinks subtype data
5.6 years ago by atakanekiz ▴ 330
0
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1
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1.9k
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Comment: C: Discrepancies in TCGAbiolinks subtype data
5.6 years ago by atakanekiz ▴ 330
2
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4
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1.9k
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Discrepancies in TCGAbiolinks subtype data
tcgabiolinks tcga summarizedexperiment subtype
5.6 years ago by atakanekiz ▴ 330
0
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0
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20k
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Answer: A: GSEA analysis with Mouse (Please give some comments..)
5.6 years ago by atakanekiz ▴ 330
0
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1
reply
48k
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Comment: C: Survival analysis with gene expression
5.6 years ago by atakanekiz ▴ 330
0
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0
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1.3k
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Reading EMBL-like miRBase data into R
embl mirdb R parse
5.7 years ago by atakanekiz ▴ 330
0
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1
reply
6.6k
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Comment: A: TCGA immunotherapy treated melanoma data
5.9 years ago by atakanekiz ▴ 330
0
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1
reply
20k
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Comment: C: Integrating VDJ sequencing data with Seurat
6.3 years ago by atakanekiz ▴ 330
0
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2
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19k
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Answer: A: Associating VDJ clonotyping data with scRNA-seq in Seurat
6.3 years ago by atakanekiz ▴ 330
2
votes
1
reply
2.5k
views
Significant but very small beta coefficients in Cox proportional hazards calculation (survival)
survival RNA-Seq cox HR survival analysis
7.2 years ago by atakanekiz ▴ 330
2
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0
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2.5k
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Answer: A: Significant but very small beta coefficients in Cox proportional hazards calcula
7.2 years ago by atakanekiz ▴ 330
4
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1
reply
5.4k
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Answer: A: TCGAbiolinks TCGA-BRCA RNA-seq clinical data
7.3 years ago by atakanekiz ▴ 330
3
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2
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5.3k
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Answer: A: Differences between RTCGA and TCGAbiolinks data
7.3 years ago by atakanekiz ▴ 330
21
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13
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5.3k
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Differences between RTCGA and TCGAbiolinks data
R miRNASeq RNA-Seq Survival analysis
7.3 years ago by atakanekiz ▴ 330
0
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0
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2.1k
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Comment: C: error in GDCprepare
7.3 years ago by atakanekiz ▴ 330
1
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1
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5.3k
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Answer: A: Differences between RTCGA and TCGAbiolinks data
7.3 years ago by atakanekiz ▴ 330
0
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0
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5.3k
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Comment: C: Differences between RTCGA and TCGAbiolinks data
7.3 years ago by atakanekiz ▴ 330
0
votes
1
reply
5.3k
views
Comment: C: Differences between RTCGA and TCGAbiolinks data
7.3 years ago by atakanekiz ▴ 330
0
votes
1
reply
5.3k
views
Comment: C: Differences between RTCGA and TCGAbiolinks data
7.3 years ago by atakanekiz ▴ 330
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