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Comment: Comment: Which gatk version generates VCF version 4.1
18 months ago by taniamahmood38 ▴ 60
0
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0
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1.2k
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Comment: Comment: Generate VCF version 4.1 using GATK version 4
18 months ago by taniamahmood38 ▴ 60
1
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1.5k
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Comment: Comment: Which gatk version generates VCF version 4.1
18 months ago by taniamahmood38 ▴ 60
0
votes
1
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1.2k
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Comment: Comment: Generate VCF version 4.1 using GATK version 4
18 months ago by taniamahmood38 ▴ 60
0
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1
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1.2k
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Comment: Comment: HOW CAN I GENERATE VCF VERSION 4.1 USING GATK VERSION 4?
18 months ago by taniamahmood38 ▴ 60
1
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6
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1.2k
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Generate VCF version 4.1 using GATK version 4
gatk4.0 vcf4.1
18 months ago by taniamahmood38 ▴ 60
0
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1
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1.5k
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Comment: Comment: Which gatk version generates VCF version 4.1
18 months ago by taniamahmood38 ▴ 60
0
votes
1
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1.5k
views
Comment: Comment: Which gatk version generates VCF version 4.1
18 months ago by taniamahmood38 ▴ 60
3
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8
replies
1.5k
views
Which gatk version generates VCF version 4.1
vcf_v4.1 gatk
18 months ago by taniamahmood38 ▴ 60
0
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5
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1.3k
views
Error: ##fileformat=VCFv4.2 does not exist
Pharmcat VCF
updated 19 months ago by ▴ 480 • written 19 months ago by ▴ 60
0
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3
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2.1k
views
How to unzip a file with .bgz extention
.bgz unzip
updated 19 months ago by 145k • written 19 months ago by ▴ 60
0
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0
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1.3k
views
Comment: Comment: Error: ##fileformat=VCFv4.2 does not exist
19 months ago by taniamahmood38 ▴ 60
0
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0
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1.3k
views
Comment: Comment: Issue with VCF format while using Pharmcat
19 months ago by taniamahmood38 ▴ 60
0
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0
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1.3k
views
Comment: Comment: Issue with VCF format while using Pharmcat
19 months ago by taniamahmood38 ▴ 60
0
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7
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1.3k
views
Issue with VCF format while using Pharmcat
Pharmcat VCF
19 months ago by taniamahmood38 ▴ 60
0
votes
2
replies
1.3k
views
Comment: Comment: Issue with VCF format while using Pharmcat
19 months ago by taniamahmood38 ▴ 60
0
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1
reply
1.3k
views
Comment: Comment: Encountering error while using sudo apt-get update command
22 months ago by taniamahmood38 ▴ 60
1
vote
3
replies
1.3k
views
Encountering error while using sudo apt-get update command
ubuntu offtopic
updated 22 months ago by 55k • written 22 months ago by ▴ 60
0
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0
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3.1k
views
Comment: Comment: How to install latest version of bcftools on ubuntu?
22 months ago by taniamahmood38 ▴ 60
3
votes
2
replies
3.1k
views
How to install latest version of bcftools on ubuntu?
bcftools ubuntu bcftools1.16
updated 15 months ago by 44k • written 22 months ago by ▴ 60
0
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0
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349
views
Pool-HMM formula
Pool-HMM Python_program
23 months ago by taniamahmood38 ▴ 60
0
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0
replies
357
views
Visualization of Pool-HMM results
Pool-HMM graphs
24 months ago by taniamahmood38 ▴ 60
0
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0
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932
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Comment: Comment: Fastq to Fasta format
2.0 years ago by taniamahmood38 ▴ 60
0
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1
reply
932
views
Comment: Comment: Fastq to Fasta format
2.0 years ago by taniamahmood38 ▴ 60
0
votes
4
replies
932
views
Fastq to Fasta format
galaxy fastq fasta
2.0 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
336
views
How to calculate per site transition probability between hidden states.
-kargument pool-HMM
2.2 years ago by taniamahmood38 ▴ 60
0
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0
replies
361
views
Require DH script
DH TajimasD H-statistics
2.2 years ago by taniamahmood38 ▴ 60
0
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0
replies
412
views
Is Tajima's Pi and Wattersons Theta site frequency spectrum statistics?
TajimasD WattersonsTheta
2.2 years ago by taniamahmood38 ▴ 60
0
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0
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424
views
Require combine script of Tajima'sD and Fay and Wu's H stats
H-statistics TajimasD
2.3 years ago by taniamahmood38 ▴ 60
0
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0
replies
473
views
Require composite script of Hp and ROH statistics
ROH Pooled-heterozygosity github script
2.3 years ago by taniamahmood38 ▴ 60
0
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0
replies
826
views
Comment: Comment: How to convert VCF into hapmatrix format?
2.3 years ago by taniamahmood38 ▴ 60
0
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1
reply
826
views
Comment: Comment: How to convert VCF into hapmatrix format?
2.3 years ago by taniamahmood38 ▴ 60
0
votes
4
replies
826
views
How to convert VCF into hapmatrix format?
popseq hapmatrix vcf
2.3 years ago by taniamahmood38 ▴ 60
0
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0
replies
841
views
Comment: Comment: How to generate bam to vcf containing ancestral allele (AA) information?
2.3 years ago by taniamahmood38 ▴ 60
0
votes
1
reply
841
views
Comment: Comment: How to generate bam to vcf containing ancestral allele (AA) information?
2.3 years ago by taniamahmood38 ▴ 60
1
vote
4
replies
841
views
How to generate bam to vcf containing ancestral allele (AA) information?
ancestral_allele vcf bam
updated 2.3 years ago by 44k • written 2.3 years ago by ▴ 60
0
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0
replies
1.7k
views
Comment: Comment: How to add the ancestral allele (AA) information in a vcf file?
2.3 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
526
views
Understanding the output generated using rehh package
sfs Rehh
2.3 years ago by taniamahmood38 ▴ 60
0
votes
1
reply
1.7k
views
Comment: Comment: How to add the ancestral allele (AA) information in a vcf file?
2.3 years ago by taniamahmood38 ▴ 60
2
votes
4
replies
1.7k
views
How to add the ancestral allele (AA) information in a vcf file?
AA_tag vcf
2.3 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
355
views
Issue in computing the site frequency spectrum statistics using Rehh package
Rehh R
2.3 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
897
views
Comment: Comment: Error in mapply(function(x, y)
2.4 years ago by taniamahmood38 ▴ 60
2
votes
2
replies
897
views
Error in mapply(function(x, y)
rehh R
2.4 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
391
views
Convert pileup file to genetic map file
genetic_map pileup .map
2.4 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
895
views
Comment: Comment: Problem assigning read group to a sample
2.4 years ago by taniamahmood38 ▴ 60
0
votes
1
reply
895
views
Comment: Comment: Problem assigning read group to a sample
2.4 years ago by taniamahmood38 ▴ 60
2
votes
4
replies
895
views
Problem assigning read group to a sample
RG_tag popbam bam pooled-seq
2.4 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
8.8k
views
Comment: Comment: samtools addreplacerg gives error
2.4 years ago by taniamahmood38 ▴ 60
2
votes
1
reply
8.8k
views
Comment: Comment: samtools addreplacerg gives error
2.4 years ago by taniamahmood38 ▴ 60
0
votes
0
replies
888
views
Comment: Comment: popbam: command not found
2.4 years ago by taniamahmood38 ▴ 60
98 results • Page 1 of 2
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