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0
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0
replies
169
views
GATK CollectReadCounts UnsatisfiedLinkError hdf5 java
unsatisfiedlinkerror
gatk
hdf5
collectreadcounts
java
3 months ago by
chrisgr
▴ 20
0
votes
0
replies
5.1k
views
Comment:
Comment: Maximum Read Depth
4 months ago by
chrisgr
▴ 20
0
votes
1
reply
4.3k
views
Comment:
Comment: GATK4 VariantRecalibrator resource error
5 months ago by
chrisgr
▴ 20
0
votes
0
replies
232
views
Help wanted for a struggling bioinfmatician! GATK Variantrecalibration
VSQR
applyVSQR
gatk
variantrecalibration
5 months ago by
chrisgr
▴ 20
0
votes
0
replies
377
views
Comment:
Comment: Filtering VCF files
5 months ago by
chrisgr
▴ 20
0
votes
2
replies
377
views
Filtering VCF files
Filtering
GATK
HaplotypeCaller
mapping
VCF
updated 5 months ago by
Pierre Lindenbaum
157k • written 5 months ago by
chrisgr
▴ 20
0
votes
1
reply
307
views
Novogene somatic results with GATK mutect2
Mutect2
Novogene
GATK
somatic
VCF
updated 8 months ago by
GenoMax
135k • written 8 months ago by
chrisgr
▴ 20
0
votes
0
replies
839
views
Comment:
Comment: IGV coverage bar has color, but no mutation?
8 months ago by
chrisgr
▴ 20
0
votes
0
replies
839
views
Comment:
Comment: IGV coverage bar has color, but no mutation?
8 months ago by
chrisgr
▴ 20
0
votes
2
replies
839
views
Comment:
Comment: IGV coverage bar has color, but no mutation?
8 months ago by
chrisgr
▴ 20
2
votes
6
replies
839
views
IGV coverage bar has color, but no mutation?
mutation
IGV
8 months ago by
chrisgr
▴ 20
0
votes
0
replies
1.6k
views
Comment:
Comment: RNAseq count which strand to use
21 months ago by
chrisgr
▴ 20
0
votes
0
replies
2.1k
views
Comment:
Comment: Enrichr input genes, up, down, or both at once
24 months ago by
chrisgr
▴ 20
0
votes
1
reply
2.1k
views
Comment:
Comment: Enrichr input genes, up, down, or both at once
24 months ago by
chrisgr
▴ 20
5
votes
6
replies
2.1k
views
Enrichr input genes, up, down, or both at once
genes
Enrichr
DEA
updated 24 months ago by
EagleEye
7.5k • written 24 months ago by
chrisgr
▴ 20
0
votes
0
replies
1.1k
views
Comment:
Comment: BCFtools Allelic Depth format nowhere explained?
2.1 years ago by
chrisgr
▴ 20
0
votes
1
reply
1.1k
views
Comment:
Comment: BCFtools Allelic Depth format nowhere explained?
2.1 years ago by
chrisgr
▴ 20
1
vote
5
replies
1.1k
views
BCFtools Allelic Depth format nowhere explained?
Allelic
Samtools
BCFtools
Depth
AD
2.1 years ago by
chrisgr
▴ 20
0
votes
0
replies
1.1k
views
Comment:
Comment: BCFtools Allelic Depth format nowhere explained?
2.1 years ago by
chrisgr
▴ 20
2
votes
2
replies
611
views
Bowtie2 adds insertions instead of allowing extention
bowtie2
short reads
aligning
insertions
3.4 years ago by
chrisgr
▴ 20
0
votes
0
replies
999
views
Comment:
C: how to build bowtie2 reference sequences
3.4 years ago by
chrisgr
▴ 20
1
vote
1
reply
999
views
Comment:
C: how to build bowtie2 reference sequences
3.4 years ago by
chrisgr
▴ 20
0
votes
1
reply
999
views
Comment:
C: how to build bowtie2 reference sequences
3.4 years ago by
chrisgr
▴ 20
5
votes
6
replies
999
views
how to build bowtie2 reference sequences
bowtie2
reference sequence
bowtie2-build
IGV tools
updated 3.4 years ago by
GenoMax
135k • written 3.4 years ago by
chrisgr
▴ 20
0
votes
1
reply
2.1k
views
Comment:
C: visualize my .BAM file in IGV
3.5 years ago by
chrisgr
▴ 20
0
votes
1
reply
2.1k
views
Comment:
C: visualize my .BAM file in IGV
3.5 years ago by
chrisgr
▴ 20
4
votes
8
replies
2.1k
views
visualize my .BAM file in IGV
RNA
bowtie2
IGV
alignment
BAM
updated 6 months ago by
Ram
40k • written 3.5 years ago by
chrisgr
▴ 20
3
votes
2
replies
3.2k
views
In Enrichr: What is "Gene weight" or "levels of membership"?
enrichr
GEA
Gene enrichment analyis
updated 5.1 years ago by
Ram
40k • written 5.1 years ago by
chrisgr
▴ 20
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