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642
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No over-represented GO terms, but plenty from GSEA?
enricher clusterprofiler
updated 12 months ago by ★ 3.1k • written 12 months ago by ▴ 40
3
votes
2
replies
747
views
RNA-seq heatmaps: effective length, RPKM vs. CPM
edgeR RNA-seq
updated 12 months ago by 89k • written 12 months ago by ▴ 40
2
votes
2
replies
1.8k
views
EdgeR: upregulated with respect to what group?
upregulated edgeR
updated 20 months ago by ★ 8.4k • written 3.2 years ago by ▴ 40
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0
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1.0k
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Comment: Comment: How to find distance between two genomic features (one 0-based, one 1-based)?
3.1 years ago by bioinfo2345 ▴ 40
1
vote
2
replies
1.0k
views
How to find distance between two genomic features (one 0-based, one 1-based)?
bedtools genomic-coordinates BLAST
updated 2.4 years ago by 45k • written 3.1 years ago by ▴ 40
0
votes
0
replies
693
views
RSEM/edgeR/Trinity: Unsorted raw matrix produce nonsense rpkm() results?
RSEM edgeR Trinity
3.2 years ago by bioinfo2345 ▴ 40
3
votes
2
replies
2.4k
views
Does RSEM ignore STAR's splice-aware nature?
RSEM STAR
updated 3.2 years ago by 7.2k • written 3.2 years ago by ▴ 40
19
votes
18
replies
20k
views
Why does bacterial codon table translate GTG start codon to V and not M?
bacterial codon bacterial code GTG Valine
updated 6.1 years ago by 9.3k • written 6.7 years ago by ▴ 40
0
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1
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3.0k
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Comment: C: What does it mean if a gene is not found in an assembly?
6.5 years ago by bioinfo2345 ▴ 40
0
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0
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3.0k
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Comment: C: What does it mean if a gene is not found in an assembly?
6.5 years ago by bioinfo2345 ▴ 40
0
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1
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3.0k
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Comment: C: What does it mean if a gene is not found in an assembly?
6.5 years ago by bioinfo2345 ▴ 40
0
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0
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3.0k
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Comment: C: What does it mean if a gene is not found in an assembly?
6.5 years ago by bioinfo2345 ▴ 40
0
votes
1
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3.0k
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Comment: C: What does it mean if a gene is not found in an assembly?
6.5 years ago by bioinfo2345 ▴ 40
0
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1
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3.0k
views
Comment: C: What does it mean if a gene is not found in an assembly?
6.5 years ago by bioinfo2345 ▴ 40
0
votes
14
replies
3.0k
views
What does it mean if a gene is not found in an assembly?
Assembly gene identification
updated 6.5 years ago by ★ 3.3k • written 6.5 years ago by ▴ 40
0
votes
0
replies
20k
views
Comment: C: Why does bacterial codon table translate GTG start codon to V and not M?
6.7 years ago by bioinfo2345 ▴ 40
0
votes
1
reply
20k
views
Comment: C: Why does bacterial codon table translate GTG start codon to V and not M?
6.7 years ago by bioinfo2345 ▴ 40
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