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Comment: Comment: how to count variants par sample per chromosome in a vcf file?
3.3 years ago by Leandro Lima ▴ 970
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25k
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Comment: C: intersect VCF files
4.5 years ago by Leandro Lima ▴ 970
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2.6k
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Comment: C: Alternatives to Broad's DAPPLE tool?
updated 4.6 years ago by 44k • written 8.5 years ago by ▴ 970
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Answer: A: Cytogenic Location To Genome Coordinates In R
updated 4.6 years ago by 44k • written 9.5 years ago by ▴ 970
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Answer: A: How To Obtain Chromosome Locus From Coordinates
updated 4.9 years ago by 44k • written 9.5 years ago by ▴ 970
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Job: Bioinformatician / Biostatistician (Gladstone Institutes - San Francisco, CA)
UCSF Statistics RNA-Seq next-gen
updated 14 months ago by 44k • written 5.1 years ago by ▴ 970
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Comment: C: XHMM on whole genome sequencing data
updated 5.9 years ago by 44k • written 8.4 years ago by ▴ 970
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2.4k
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Answer: A: Genome Version Of Targetscan
5.9 years ago by Leandro Lima ▴ 970
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39k
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Comment: C: List Of Genome Sequencing Centers/Institutes
6.2 years ago by Leandro Lima ▴ 970
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7.9k
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Comment: C: How to use GRCh38 as reference for Annotating the variants using Annovar?
6.3 years ago by Leandro Lima ▴ 970
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Answer: A: SnpMatrix from VCF file
6.4 years ago by Leandro Lima ▴ 970
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5.5k
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Answer: A: visualize CNV data based on WGS
6.5 years ago by Leandro Lima ▴ 970
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1.4k
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Comment: C: Machine Learning/Deep Learning approaches to integrate genotype and annotation i
6.5 years ago by Leandro Lima ▴ 970
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1.4k
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Machine Learning/Deep Learning approaches to integrate genotype and annotation information for predictions?
machine learning deep learning annotation
updated 6.5 years ago by ▴ 990 • written 6.5 years ago by ▴ 970
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10k
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Comment: C: ./ Vs "0/0" In Vcf Files
6.7 years ago by Leandro Lima ▴ 970
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3.9k
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Answer: A: Data retrieval from GEO
6.9 years ago by Leandro Lima ▴ 970
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4.9k
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Comment: Comment: CNV frequencies and MAF
updated 2.5 years ago by 44k • written 7.5 years ago by ▴ 970
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5
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4.9k
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CNV frequencies and MAF
MAF XHMM CNV
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 970
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1
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2.8k
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Comment: C: Semantic Similarity against all MeSH categories
7.5 years ago by Leandro Lima ▴ 970
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2.8k
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Comment: C: Semantic Similarity against all MeSH categories
7.6 years ago by Leandro Lima ▴ 970
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Comment: C: Gatk - Haplotypecaller Is So Slow, What Is Faster And As Good?
7.7 years ago by Leandro Lima ▴ 970
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2.0k
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Comment: C: help geometadb r package
7.8 years ago by Leandro Lima ▴ 970
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4.8k
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Comment: C: How to search/filter GEO datasets according platform (Illumina/Affymetrix)
7.8 years ago by Leandro Lima ▴ 970
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1
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5.7k
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Answer: A: Difficult To Download Gene Sequences From Ncbi
7.8 years ago by Leandro Lima ▴ 970
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7.3k
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Comment: C: Tools for SV & CNV detection
8.1 years ago by Leandro Lima ▴ 970
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1
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2.5k
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Comment: C: Existing methods to evaluate the performance of SV/CNV calling tools
8.2 years ago by Leandro Lima ▴ 970
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3
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2.5k
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Existing methods to evaluate the performance of SV/CNV calling tools
SV CNV
updated 2.0 years ago by 44k • written 8.4 years ago by ▴ 970
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7.3k
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Comment: C: Tools for SV & CNV detection
8.5 years ago by Leandro Lima ▴ 970
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7.3k
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Answer: A: Tools for SV & CNV detection
8.5 years ago by Leandro Lima ▴ 970
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1.6k
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Answer: A: Gene network analysis
8.5 years ago by Leandro Lima ▴ 970
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6.1k
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Comment: C: CNVnator installation error
8.5 years ago by Leandro Lima ▴ 970
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6.8k
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News: A Bioinformatics Jobs AMA (Ask Me Anything) on Reddit
reddit r market
updated 24 months ago by 44k • written 8.6 years ago by ▴ 970
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Comment: C: Pack your bags and move to Portland!! Multiple network biology/pathway informati
8.6 years ago by Leandro Lima ▴ 970
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Comment: C: Difference Between "Mate Pair" And "Pair-End"
8.7 years ago by Leandro Lima ▴ 970
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4.8k
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Comment: C: samtools error file
8.7 years ago by Leandro Lima ▴ 970
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2.5k
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Answer: A: Simulating Cnv Into Genome Reference
8.9 years ago by Leandro Lima ▴ 970
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2.5k
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Comment: C: Simulating Cnv Into Genome Reference
8.9 years ago by Leandro Lima ▴ 970
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2.7k
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Comment: Comment: Cnv Data Set
updated 22 months ago by 44k • written 8.9 years ago by ▴ 970
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5.3k
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Comment: C: Short Read Simulator For Cnv Indel?
8.9 years ago by Leandro Lima ▴ 970
2
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1
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12k
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Comment: Comment: bedtools 2.0 merge - "unable to open file or unable to determine types"
updated 2.5 years ago by 44k • written 9.4 years ago by ▴ 970
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1
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4.9k
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Answer: Answer: CNV frequencies and MAF
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 970
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7.5k
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Comment: C: How To Reorder Bam File Contigs For The Gatk Pipeline
9.8 years ago by Leandro Lima ▴ 970
2
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1
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3.9k
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Answer: Answer: any database for 1000G MAF available?
updated 2.6 years ago by 44k • written 10.0 years ago by ▴ 970
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1
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40k
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Answer: A: 1000 Genomes Ld Calculation
10.4 years ago by Leandro Lima ▴ 970
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1
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20k
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Comment: C: Multi-Panel Heatmaps In R
10.7 years ago by Leandro Lima ▴ 970
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1
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3.7k
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Comment: C: How To Visualize The Quality Of Sequencing Data In Colorspace (Solid) Format?
10.8 years ago by Leandro Lima ▴ 970
2
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3.9k
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Answer: A: Percentage Of Genome All Humans Share
10.9 years ago by Leandro Lima ▴ 970
1
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1
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4.8k
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Answer: A: How To Identify Large Arrangements And Transposable Elements In Ngs Data?
10.9 years ago by Leandro Lima ▴ 970
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1
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6.2k
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Answer: A: [Cytoscape] Two Mappings For Node Fill Colour
10.9 years ago by Leandro Lima ▴ 970
2
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1
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2.6k
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Answer: A: Checking How Good A Correlation Is
10.9 years ago by Leandro Lima ▴ 970
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